RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 CYLC1P35663 651 aaPredicted RBP20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 ROR1Q01973 937 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 GPR17Q13304 367 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 FAM35AQ86V20 835 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 WDTC1Q8N5D0 677 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 MED10Q9BTT4 135 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 RHOBTB2Q9BYZ6 727 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 LHX5Q9H2C1 402 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 RXFP1Q9HBX9 757 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 ENTPD7Q9NQZ7 604 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 TLR9Q9NR96 1032 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 TAS2R14Q9NYV8 317 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 HESX1Q9UBX0 185 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 NAGPAQ9UK23 515 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 NENFQ9UMX5 172 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 SSX2IPQ9Y2D8 614 aa20.04■□□□□ 0.8
TNFRSF1A-213ENST00000540022 PLXNA4Q9HCM2 1894 aa20.03■□□□□ 0.8
TNFRSF1A-213ENST00000540022 WDR27A2RRH5 827 aa20.03■□□□□ 0.8
TNFRSF1A-213ENST00000540022 CA8P35219 290 aa20.03■□□□□ 0.8
TNFRSF1A-213ENST00000540022 GPD2P43304 727 aa20.03■□□□□ 0.8
TNFRSF1A-213ENST00000540022 NOMO3P69849 1222 aa20.03■□□□□ 0.8
TNFRSF1A-213ENST00000540022 NFE2Q16621 373 aaPredicted RBP20.03■□□□□ 0.8
TNFRSF1A-213ENST00000540022 CLEC16AQ2KHT3 1053 aa20.03■□□□□ 0.8
TNFRSF1A-213ENST00000540022 TRIM72Q6ZMU5 477 aa20.03■□□□□ 0.8
TNFRSF1A-213ENST00000540022 ANKRD52Q8NB46 1076 aa20.03■□□□□ 0.8
TNFRSF1A-213ENST00000540022 PGLYRP2Q96PD5 576 aa20.03■□□□□ 0.8
TNFRSF1A-213ENST00000540022 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.03■□□□□ 0.8
TNFRSF1A-213ENST00000540022 FNIP2Q9P278 1114 aa20.03■□□□□ 0.8
TNFRSF1A-213ENST00000540022 IRAK3Q9Y616 596 aa20.03■□□□□ 0.8
TNFRSF1A-213ENST00000540022 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 EIF3CLB5ME19 914 aaKnown RBP20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 FSCN2O14926 492 aa20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 TEX28O15482 410 aa20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 CNPP09543 421 aaKnown RBP20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 UNGP13051 313 aaPredicted RBP20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 CDH5P33151 784 aaPredicted RBP20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 NAA35Q5VZE5 725 aa20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 PLPP4Q5VZY2 271 aa20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 ALKBH5Q6P6C2 394 aaKnown RBP20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 RNF19BQ6ZMZ0 732 aa20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 C4orf50Q6ZRC1 276 aa20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 TOGARAM2Q6ZUX3 1019 aa20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 DNAAF5Q86Y56 855 aa20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 SPATA2LQ8IUW3 424 aaPredicted RBP20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 ATAD1Q8NBU5 361 aa20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 C1orf131Q8NDD1 294 aaKnown RBP20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 EIF3CQ99613 913 aaKnown RBP20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 CYTH4Q9UIA0 394 aa20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 TTC28Q96AY4 2481 aa20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 NCOR1O75376 2440 aa20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 TCF20Q9UGU0 1960 aaKnown RBP20.02■□□□□ 0.8
TNFRSF1A-213ENST00000540022 MTMR11A4FU01 709 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 HIDE1A8MVS5 230 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 TMCO5BA8MYB1 307 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 TULP2O00295 520 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 BEST1O76090 585 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 LCA5LO95447 670 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 VNN2O95498 520 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 LSM8O95777 96 aaKnown RBP20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 BDNFP23560 247 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 CACNA2D1P54289 1103 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 PDE4CQ08493 712 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 CCDC122Q5T0U0 273 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 MRPL43Q8N983 215 aaKnown RBP20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 TMEM35BQ8NCS4 154 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 ACRBPQ8NEB7 543 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 MICAL1Q8TDZ2 1067 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 CPA5Q8WXQ8 436 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 SECISBP2LQ93073 1101 aaKnown RBP20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 DESI2Q9BSY9 194 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 DUSP16Q9BY84 665 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 KRT82Q9NSB4 513 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 TMEM30AQ9NV96 361 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 ABI2Q9NYB9 513 aaPredicted RBP20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 LMCD1Q9NZU5 365 aa20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 REXO2Q9Y3B8 237 aaKnown RBP20.02■□□□□ 0.79
TNFRSF1A-213ENST00000540022 C2orf71A6NGG8 1288 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 AP1G2O75843 785 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 FAM200BP0CF97 657 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 GZMAP12544 262 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 NPR3P17342 541 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 CYP2F1P24903 491 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 NDUFV1P49821 464 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 BCAT1P54687 386 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 CREMQ03060 361 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 BST2Q10589 180 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 RAB33AQ14088 237 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 SMC1AQ14683 1233 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 CFAP221Q4G0U5 840 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 HS1BP3Q53T59 392 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 CLEC20AQ6ZU45 233 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 SLC35F5Q8WV83 523 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 TRIM44Q96DX7 344 aaPredicted RBP20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 SMARCD1Q96GM5 515 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 FUBP3Q96I24 572 aaKnown RBP eCLIP20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 KLHL5Q96PQ7 755 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 SMOQ99835 787 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 CRISPLD1Q9H336 500 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 NGRNQ9NPE2 291 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 PYCARDQ9ULZ3 195 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms