RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 SMG9Q9H0W8 520 aaKnown RBP16.69■□□□□ 0.26
CIT-210ENST00000539413 HEBP1Q9NRV9 189 aa16.69■□□□□ 0.26
CIT-210ENST00000539413 TMEM30AQ9NV96 361 aa16.69■□□□□ 0.26
CIT-210ENST00000539413 UXTQ9UBK9 157 aaPredicted RBP16.69■□□□□ 0.26
CIT-210ENST00000539413 HMGXB4Q9UGU5 601 aa16.69■□□□□ 0.26
CIT-210ENST00000539413 ZNF318Q5VUA4 2279 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 PPP1R3GB7ZBB8 358 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 F8VP50 259 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 TRIM66O15016 1216 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 SLC16A3O15427 465 aaKnown RBP16.68■□□□□ 0.26
CIT-210ENST00000539413 GALR2O43603 387 aaPredicted RBP16.68■□□□□ 0.26
CIT-210ENST00000539413 ANXA13P27216 316 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 GTF2H1P32780 548 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 NUBP1P53384 320 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 NOP14P78316 857 aaKnown RBP16.68■□□□□ 0.26
CIT-210ENST00000539413 DCAF17Q5H9S7 520 aaPredicted RBP16.68■□□□□ 0.26
CIT-210ENST00000539413 KRT39Q6A163 491 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 TXNDC8Q6A555 127 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 KLHL10Q6JEL2 608 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 ACOT1Q86TX2 421 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 CMTM8Q8IZV2 173 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 MRPS31Q92665 395 aaKnown RBP16.68■□□□□ 0.26
CIT-210ENST00000539413 SEMA4DQ92854 862 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 DNASE1L2Q92874 299 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 IRF7Q92985 503 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 TNIP3Q96KP6 325 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 C8orf48Q96LL4 319 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 DDX23Q9BUQ8 820 aaKnown RBP16.68■□□□□ 0.26
CIT-210ENST00000539413 BCO2Q9BYV7 579 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 IMPG2Q9BZV3 1241 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 ELOVL4Q9GZR5 314 aa16.68■□□□□ 0.26
CIT-210ENST00000539413 COL4A2P08572 1712 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 NUP210Q8TEM1 1887 aaPredicted RBP16.67■□□□□ 0.26
CIT-210ENST00000539413 KANSL1LA0AUZ9 987 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 DPYSL4O14531 572 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 ZNF263O14978 683 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 DCNP07585 359 aaKnown RBP16.67■□□□□ 0.26
CIT-210ENST00000539413 CD72P21854 359 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 DDX6P26196 483 aaKnown RBP eCLIP16.67■□□□□ 0.26
CIT-210ENST00000539413 WEE1P30291 646 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 PPP1R2P41236 205 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 MXI1P50539 228 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 NDST1P52848 882 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 PTPN5P54829 565 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 USP46P62068 366 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 NHLH1Q02575 133 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 FCHO2Q0JRZ9 810 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 CAMK4Q16566 473 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 TCERG1LQ5VWI1 586 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 TPRG1Q6ZUI0 275 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 DENND5BQ6ZUT9 1274 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 PAQR9Q6ZVX9 377 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 MON1AQ86VX9 555 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 YAF2Q8IY57 180 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 PJA1Q8NG27 643 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 CEP295NLQ96MC4 621 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 DUSP9Q99956 384 aaKnown RBP16.67■□□□□ 0.26
CIT-210ENST00000539413 NIF3L1Q9GZT8 377 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 OBP2AQ9NY56 170 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 SIT1Q9Y3P8 196 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 WDFY4Q6ZS81 3184 aa16.67■□□□□ 0.26
CIT-210ENST00000539413 PTPRDP23468 1912 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 SHISA7A6NL88 538 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 ARNTLO00327 626 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 STX10O60499 249 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 OBSL1O75147 1896 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 AVPR1AP37288 418 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 CBWD6Q4V339 395 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 CBWD3Q5JTY5 395 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 CBWD5Q5RIA9 395 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 TTI2Q6NXR4 508 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 FAM35AQ86V20 835 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 UNC93AQ86WB7 457 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 CCDC105Q8IYK2 499 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 FUKQ8N0W3 1084 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 CCDC150Q8NCX0 1101 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 FBXL13Q8NEE6 735 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 BPIFB1Q8TDL5 484 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 NELFBQ8WX92 580 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 ZFYVE19Q96K21 471 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 TWNKQ96RR1 684 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 MED10Q9BTT4 135 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 TRPV5Q9NQA5 729 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 RAB20Q9NX57 234 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 ARMCX3Q9UH62 379 aaPredicted RBP16.66■□□□□ 0.26
CIT-210ENST00000539413 ZMYM5Q9UJ78 669 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 CTNND2Q9UQB3 1225 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 CCL26Q9Y258 94 aa16.66■□□□□ 0.26
CIT-210ENST00000539413 MTF2Q9Y483 593 aaPredicted RBP16.66■□□□□ 0.26
CIT-210ENST00000539413 SOBPA7XYQ1 873 aa16.65■□□□□ 0.26
CIT-210ENST00000539413 H0Y858 1186 aa16.65■□□□□ 0.26
CIT-210ENST00000539413 CHADO15335 359 aa16.65■□□□□ 0.26
CIT-210ENST00000539413 CCDC130P13994 396 aa16.65■□□□□ 0.26
CIT-210ENST00000539413 CD58P19256 250 aa16.65■□□□□ 0.26
CIT-210ENST00000539413 INCA1Q0VD86 236 aa16.65■□□□□ 0.26
CIT-210ENST00000539413 UBXN2BQ14CS0 331 aa16.65■□□□□ 0.26
CIT-210ENST00000539413 CRYBG2Q8N1P7 616 aa16.65■□□□□ 0.26
CIT-210ENST00000539413 CELF5Q8N6W0 485 aaKnown RBP16.65■□□□□ 0.26
CIT-210ENST00000539413 DTWD2Q8NBA8 298 aa16.65■□□□□ 0.26
CIT-210ENST00000539413 USP13Q92995 863 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms