RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 DENND4CQ5VZ89 1909 aa15.17■□□□□ 0.02
PBX3-212ENST00000538998 ATG2BQ96BY7 2078 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 OBSL1O75147 1896 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 FASNP49327 2511 aaKnown RBP15.16■□□□□ 0.02
PBX3-212ENST00000538998 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 SPAARA0A1B0GVQ0 90 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 TAF4O00268 1085 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 TRAK2O60296 914 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 FAM13AO94988 1023 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 ATP2C1P98194 919 aaPredicted RBP15.16■□□□□ 0.02
PBX3-212ENST00000538998 SEMA3BQ13214 749 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 BYSLQ13895 437 aaKnown RBP15.16■□□□□ 0.02
PBX3-212ENST00000538998 INTS6LQ5JSJ4 861 aaKnown RBP15.16■□□□□ 0.02
PBX3-212ENST00000538998 LYSMD4Q5XG99 296 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 ADALQ6DHV7 355 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 SLFN12LQ6IEE8 588 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 GPBP1Q86WP2 473 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 NT5DC4Q86YG4 428 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 TMEFF1Q8IYR6 380 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 PDCL2Q8N4E4 241 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 HDDC3Q8N4P3 179 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 CCDC33Q8N5R6 958 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 FNBP1Q96RU3 617 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 LINC00597Q9H2U6 94 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 POLMQ9NP87 494 aaPredicted RBP15.16■□□□□ 0.02
PBX3-212ENST00000538998 GCNT4Q9P109 453 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 AGO2Q9UKV8 859 aaKnown RBP15.16■□□□□ 0.02
PBX3-212ENST00000538998 CIZ1Q9ULV3 898 aaPredicted RBP15.16■□□□□ 0.02
PBX3-212ENST00000538998 MYH11P35749 1972 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 WDFY3Q8IZQ1 3526 aa15.16■□□□□ 0.02
PBX3-212ENST00000538998 MYO16Q9Y6X6 1858 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 FAM221BA6H8Z2 402 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 C2orf78A6NCI8 922 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 HUS1O60921 280 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 IL18RAPO95256 599 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 PFKLP17858 780 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 HDCP19113 662 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 PTGER3P43115 390 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 ATXN3P54252 364 aaPredicted RBP15.15■□□□□ 0.02
PBX3-212ENST00000538998 GTF2BQ00403 316 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 MYL7Q01449 175 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 CFAP221Q4G0U5 840 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 ZC2HC1CQ53FD0 456 aaPredicted RBP15.15■□□□□ 0.02
PBX3-212ENST00000538998 PEAR1Q5VY43 1037 aaPredicted RBP15.15■□□□□ 0.02
PBX3-212ENST00000538998 TMEM92Q6UXU6 159 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 ARMCX6Q7L4S7 300 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 TMEM86AQ8N2M4 240 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 KIAA1958Q8N8K9 716 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 CEP76Q8TAP6 659 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 SPATA18Q8TC71 538 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 RLN3Q8WXF3 142 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 FUBP3Q96I24 572 aaKnown RBP eCLIP15.15■□□□□ 0.02
PBX3-212ENST00000538998 TMEM74BQ9NUR3 256 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 DDX43Q9NXZ2 648 aaKnown RBP15.15■□□□□ 0.02
PBX3-212ENST00000538998 BCCIPQ9P287 314 aaKnown RBP eCLIP15.15■□□□□ 0.02
PBX3-212ENST00000538998 STYXL1Q9Y6J8 313 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 THADAQ6YHU6 1953 aa15.15■□□□□ 0.02
PBX3-212ENST00000538998 VWA3AA6NCI4 1184 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 MYMKA6NI61 221 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 ANKRD63C9JTQ0 380 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 SLC26A4O43511 780 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 CFIP05156 583 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 EIF2DP41214 584 aaKnown RBP15.14■□□□□ 0.01
PBX3-212ENST00000538998 HNRNPDQ14103 355 aaKnown RBP15.14■□□□□ 0.01
PBX3-212ENST00000538998 ZNF423Q2M1K9 1284 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 GAB4Q2WGN9 574 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 RILPL1Q5EBL4 403 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 RABEPKQ7Z6M1 372 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 PROSER1Q86XN7 944 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 SPATA2LQ8IUW3 424 aaPredicted RBP15.14■□□□□ 0.01
PBX3-212ENST00000538998 ALLCQ8N6M5 410 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 IL17RCQ8NAC3 791 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 TXNDC5Q8NBS9 432 aaKnown RBP15.14■□□□□ 0.01
PBX3-212ENST00000538998 PKMYT1Q99640 499 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 PILRBQ9UKJ0 227 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 GTF3C4Q9UKN8 822 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 L1RE1Q9UN81 338 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 ZNF638Q14966 1978 aaKnown RBP15.14■□□□□ 0.01
PBX3-212ENST00000538998 ABCA7Q8IZY2 2146 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 ANK1P16157 1881 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 SCN1AP35498 2009 aa15.14■□□□□ 0.01
PBX3-212ENST00000538998 AP5Z1O43299 807 aa15.13■□□□□ 0.01
PBX3-212ENST00000538998 OPHN1O60890 802 aa15.13■□□□□ 0.01
PBX3-212ENST00000538998 TBCAO75347 108 aaKnown RBP15.13■□□□□ 0.01
PBX3-212ENST00000538998 KLF8O95600 359 aaPredicted RBP15.13■□□□□ 0.01
PBX3-212ENST00000538998 CYP17A1P05093 508 aa15.13■□□□□ 0.01
PBX3-212ENST00000538998 KRT18P05783 430 aaKnown RBP15.13■□□□□ 0.01
PBX3-212ENST00000538998 HNRNPLP14866 589 aaKnown RBP eCLIP15.13■□□□□ 0.016e-7■■■□□ 15.2
PBX3-212ENST00000538998 ACAT1P24752 427 aaKnown RBP15.13■□□□□ 0.01
PBX3-212ENST00000538998 PCSK1P29120 753 aa15.13■□□□□ 0.01
PBX3-212ENST00000538998 GFPT1Q06210 699 aaPredicted RBP15.13■□□□□ 0.01
PBX3-212ENST00000538998 DUOXA1Q1HG43 343 aa15.13■□□□□ 0.01
PBX3-212ENST00000538998 EOGTQ5NDL2 527 aa15.13■□□□□ 0.01
PBX3-212ENST00000538998 ARL6IP4Q66PJ3 421 aaKnown RBP15.13■□□□□ 0.01
PBX3-212ENST00000538998 SCN4BQ8IWT1 228 aa15.13■□□□□ 0.01
PBX3-212ENST00000538998 LRRC15Q8TF66 581 aa15.13■□□□□ 0.01
PBX3-212ENST00000538998 HMGB4Q8WW32 186 aa15.13■□□□□ 0.01
PBX3-212ENST00000538998 FIZ1Q96SL8 496 aa15.13■□□□□ 0.01
PBX3-212ENST00000538998 PNKPQ96T60 521 aa15.13■□□□□ 0.01
PBX3-212ENST00000538998 ZHX3Q9H4I2 956 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms