RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	RD3	Q7Z3Z2	195 aa		5.51	□□□□□ -1.53
ATM-223	ENST00000533979	GRAMD1C	Q8IYS0	662 aa		5.51	□□□□□ -1.53
ATM-223	ENST00000533979	C1orf131	Q8NDD1	294 aa	Known RBP	5.51	□□□□□ -1.53
ATM-223	ENST00000533979	NSUN7	Q8NE18	718 aa	Known RBP	5.51	□□□□□ -1.53
ATM-223	ENST00000533979	SLC30A5	Q8TAD4	765 aa		5.51	□□□□□ -1.53
ATM-223	ENST00000533979	CCT6B	Q92526	530 aa		5.51	□□□□□ -1.53
ATM-223	ENST00000533979	TBATA	Q96M53	351 aa		5.51	□□□□□ -1.53
ATM-223	ENST00000533979	TRIB1	Q96RU8	372 aa		5.51	□□□□□ -1.53
ATM-223	ENST00000533979	SMO	Q99835	787 aa		5.51	□□□□□ -1.53
ATM-223	ENST00000533979	HEPH	Q9BQS7	1158 aa		5.51	□□□□□ -1.53
ATM-223	ENST00000533979	LRFN3	Q9BTN0	628 aa		5.51	□□□□□ -1.53
ATM-223	ENST00000533979	ISCA1	Q9BUE6	129 aa		5.51	□□□□□ -1.53
ATM-223	ENST00000533979	SIK2	Q9H0K1	926 aa		5.51	□□□□□ -1.53
ATM-223	ENST00000533979	R3HDML	Q9H3Y0	253 aa		5.51	□□□□□ -1.53
ATM-223	ENST00000533979	WDCP	Q9H6R7	721 aa		5.51	□□□□□ -1.53
ATM-223	ENST00000533979	PCDHA3	Q9Y5H8	950 aa		5.51	□□□□□ -1.53
ATM-223	ENST00000533979	KAT6A	Q92794	2004 aa		5.51	□□□□□ -1.53
ATM-223	ENST00000533979	POLRMT	O00411	1230 aa	Known RBP	5.5	□□□□□ -1.53
ATM-223	ENST00000533979	PROP1	O75360	226 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	SOAT2	O75908	522 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	GJB1	P08034	283 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	GNAI3	P08754	354 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	PTMS	P20962	102 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	CHKA	P35790	457 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	GNAI1	P63096	354 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	TCF15	Q12870	199 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	DDX10	Q13206	875 aa	Known RBP	5.5	□□□□□ -1.53
ATM-223	ENST00000533979	KIF22	Q14807	665 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	FAM90A1	Q86YD7	464 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	DENND1C	Q8IV53	801 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	KIAA0319L	Q8IZA0	1049 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	ADGRG5	Q8IZF4	528 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	KRT78	Q8N1N4	520 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	OR2C3	Q8N628	320 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	BOLL	Q8N9W6	283 aa	Known RBP	5.5	□□□□□ -1.53
ATM-223	ENST00000533979	IL17RE	Q8NFR9	667 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	ACTRT2	Q8TDY3	377 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	SNX19	Q92543	992 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	TIMP4	Q99727	224 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	BHMT2	Q9H2M3	363 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	KIAA1586	Q9HCI6	787 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	FBXO2	Q9UK22	296 aa	Predicted RBP	5.5	□□□□□ -1.53
ATM-223	ENST00000533979	ZDHHC8	Q9ULC8	765 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	LRCH1	Q9Y2L9	728 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	GPR52	Q9Y2T5	361 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	ATAD2B	Q9ULI0	1458 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	PEG3	Q9GZU2	1588 aa		5.5	□□□□□ -1.53
ATM-223	ENST00000533979	SMARCA4	P51532	1647 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	hCG_1642624	A0A1W2PR95	340 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	DYTN	A2CJ06	578 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	PRSS47	A8MTI9	375 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979		E9PLN8	166 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	EPB41L2	O43491	1005 aa	Known RBP	5.49	□□□□□ -1.53
ATM-223	ENST00000533979	ORC4	O43929	436 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	HSD3B1	P14060	373 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	IL6ST	P40189	918 aa	Predicted RBP	5.49	□□□□□ -1.53
ATM-223	ENST00000533979	NXPH1	P58417	271 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	POU5F1	Q01860	360 aa	Known RBP	5.49	□□□□□ -1.53
ATM-223	ENST00000533979	NHLH1	Q02575	133 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	TBX2	Q13207	712 aa	Predicted RBP	5.49	□□□□□ -1.53
ATM-223	ENST00000533979	DGKK	Q5KSL6	1271 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	TLDC1	Q6P9B6	456 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	DARS2	Q6PI48	645 aa	Known RBP	5.49	□□□□□ -1.53
ATM-223	ENST00000533979	CAMKK1	Q8N5S9	505 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	CCDC89	Q8N998	374 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	DDX17	Q92841	729 aa	Known RBP	5.49	□□□□□ -1.53
ATM-223	ENST00000533979	TMEM125	Q96AQ2	219 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	GCC1	Q96CN9	775 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	C1GALT1C1	Q96EU7	318 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	MVB12A	Q96EY5	273 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	FBXL20	Q96IG2	436 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	FAM167A	Q96KS9	214 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	RIPOR3	Q96MK2	946 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	VKORC1	Q9BQB6	163 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	APOL5	Q9BWW9	433 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	B3GNT5	Q9BYG0	378 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	AMBRA1	Q9C0C7	1298 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	MRPL46	Q9H2W6	279 aa	Known RBP	5.49	□□□□□ -1.53
ATM-223	ENST00000533979	AGO4	Q9HCK5	861 aa	Known RBP	5.49	□□□□□ -1.53
ATM-223	ENST00000533979	ARFGAP3	Q9NP61	516 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	CEP164	Q9UPV0	1460 aa		5.49	□□□□□ -1.53
ATM-223	ENST00000533979	SETD1B	Q9UPS6	1966 aa	Known RBP	5.48	□□□□□ -1.53
ATM-223	ENST00000533979		F5H697	171 aa		5.48	□□□□□ -1.53
ATM-223	ENST00000533979	MASP2	O00187	686 aa		5.48	□□□□□ -1.53
ATM-223	ENST00000533979	GOLIM4	O00461	696 aa		5.48	□□□□□ -1.53
ATM-223	ENST00000533979	TOR1B	O14657	336 aa		5.48	□□□□□ -1.53
ATM-223	ENST00000533979	TRIAP1	O43715	76 aa		5.48	□□□□□ -1.53
ATM-223	ENST00000533979	DTNB	O60941	627 aa		5.48	□□□□□ -1.53
ATM-223	ENST00000533979	UBXN7	O94888	489 aa		5.48	□□□□□ -1.53
ATM-223	ENST00000533979	TNFAIP3	P21580	790 aa		5.48	□□□□□ -1.53
ATM-223	ENST00000533979	PEX2	P28328	305 aa		5.48	□□□□□ -1.53
ATM-223	ENST00000533979	GRIA3	P42263	894 aa		5.48	□□□□□ -1.53
ATM-223	ENST00000533979	PIK3CG	P48736	1102 aa		5.48	□□□□□ -1.53
ATM-223	ENST00000533979	HNRNPM	P52272	730 aa	Known RBP eCLIP	5.48	□□□□□ -1.53
ATM-223	ENST00000533979	C21orf58	P58505	322 aa		5.48	□□□□□ -1.53
ATM-223	ENST00000533979	TNFAIP2	Q03169	654 aa		5.48	□□□□□ -1.53
ATM-223	ENST00000533979	ITIH3	Q06033	890 aa		5.48	□□□□□ -1.53
ATM-223	ENST00000533979	NOG	Q13253	232 aa		5.48	□□□□□ -1.53
ATM-223	ENST00000533979	TAPT1	Q6NXT6	567 aa		5.48	□□□□□ -1.53
ATM-223	ENST00000533979	HEATR3	Q7Z4Q2	680 aa		5.48	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms