RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 MOSPD3O75425 235 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 AP1G2O75843 785 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 NOL4O94818 638 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 DDX6P26196 483 aaKnown RBP eCLIP14.22□□□□□ -0.13
CAPN1-227ENST00000533909 AVPR1AP37288 418 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 MCCD1P59942 119 aaPredicted RBP14.22□□□□□ -0.13
CAPN1-227ENST00000533909 CYP4F8P98187 520 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 PFKPQ01813 784 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 INCA1Q0VD86 236 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 IFRD2Q12894 506 aaPredicted RBP14.22□□□□□ -0.13
CAPN1-227ENST00000533909 TANGO2Q6ICL3 276 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 DENND5BQ6ZUT9 1274 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 HFE2Q6ZVN8 426 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 FAM35AQ86V20 835 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 FAM114A1Q8IWE2 563 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 SIX5Q8N196 739 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 GPT2Q8TD30 523 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 TRMT2BQ96GJ1 504 aaKnown RBP14.22□□□□□ -0.13
CAPN1-227ENST00000533909 SMARCD1Q96GM5 515 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 CNOT6LQ96LI5 555 aaKnown RBP14.22□□□□□ -0.13
CAPN1-227ENST00000533909 C8orf48Q96LL4 319 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 ZSWIM3Q96MP5 696 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 RPP25Q9BUL9 199 aaKnown RBP14.22□□□□□ -0.13
CAPN1-227ENST00000533909 B3GNT5Q9BYG0 378 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 TASP1Q9H6P5 420 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 TRPC7Q9HCX4 862 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 DMAP1Q9NPF5 467 aaPredicted RBP14.22□□□□□ -0.13
CAPN1-227ENST00000533909 KRT82Q9NSB4 513 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 FAM49BQ9NUQ9 324 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 HMGXB4Q9UGU5 601 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 CA14Q9ULX7 337 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 HCN4Q9Y3Q4 1203 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 NME7Q9Y5B8 376 aa14.22□□□□□ -0.13
CAPN1-227ENST00000533909 P4HA2O15460 535 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 AFPP02771 609 aaKnown RBP14.21□□□□□ -0.13
CAPN1-227ENST00000533909 FAM200BP0CF97 657 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 CCDC130P13994 396 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 HMGA1P17096 107 aaKnown RBP14.21□□□□□ -0.13
CAPN1-227ENST00000533909 TBXAS1P24557 533 aaPredicted RBP14.21□□□□□ -0.13
CAPN1-227ENST00000533909 ERCC5P28715 1186 aaPredicted RBP14.21□□□□□ -0.13
CAPN1-227ENST00000533909 ADORA2BP29275 332 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 VIPR2P41587 438 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 MTIF2P46199 727 aaKnown RBP14.21□□□□□ -0.13
CAPN1-227ENST00000533909 KCNH2Q12809 1159 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 CUL2Q13617 745 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 DPCR1Q3MIW9 517 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 STXBP5Q5T5C0 1151 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 SASS6Q6UVJ0 657 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 TRIM59Q8IWR1 403 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 CRYBG2Q8N1P7 616 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 FBXL6Q8N531 539 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 FLCNQ8NFG4 579 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 SLC2A14Q8TDB8 520 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 HEXIM2Q96MH2 286 aaKnown RBP14.21□□□□□ -0.13
CAPN1-227ENST00000533909 NT5C1BQ96P26 610 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 TRMT61BQ9BVS5 477 aaKnown RBP14.21□□□□□ -0.13
CAPN1-227ENST00000533909 BRD9Q9H8M2 597 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 CISHQ9NSE2 258 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 WNT16Q9UBV4 365 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 COQ4Q9Y3A0 265 aa14.21□□□□□ -0.13
CAPN1-227ENST00000533909 NRG2O14511 850 aaPredicted RBP14.2□□□□□ -0.14
CAPN1-227ENST00000533909 LRRN2O75325 713 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 CILPO75339 1184 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 RTN3O95197 1032 aaPredicted RBP14.2□□□□□ -0.14
CAPN1-227ENST00000533909 ABL1P00519 1130 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 CKMP06732 381 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 PSMC3P17980 439 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 PDE6CP51160 858 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 MARSP56192 900 aaKnown RBP14.2□□□□□ -0.14
CAPN1-227ENST00000533909 GPC5P78333 572 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 GRM2Q14416 872 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 ZNF394Q53GI3 561 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 CCDC183Q5T5S1 534 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 BMP8AQ7Z5Y6 402 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 GPIHBP1Q8IV16 184 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 ARID3BQ8IVW6 561 aaPredicted RBP14.2□□□□□ -0.14
CAPN1-227ENST00000533909 MAB21L3Q8N8X9 362 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 C12orf29Q8N999 325 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 TTC16Q8NEE8 873 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 DEPDC1BQ8WUY9 529 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 TATDN2Q93075 761 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 ASIC4Q96FT7 647 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 SHDQ96IW2 340 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 MYRFLQ96LU7 910 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 SLITRK1Q96PX8 696 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 FAM124BQ9H5Z6 455 aaPredicted RBP14.2□□□□□ -0.14
CAPN1-227ENST00000533909 TRPV4Q9HBA0 871 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 IL21Q9HBE4 155 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 ARHGEF3Q9NR81 526 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 SLC2A4RGQ9NR83 387 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 TRPM5Q9NZQ8 1165 aa14.2□□□□□ -0.14
CAPN1-227ENST00000533909 TRAV19A0A0A6YYK7 116 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 HEPACAM2A8MVW5 462 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 ZNF263O14978 683 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 PMM2O15305 246 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 F11P03951 625 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 FCARP24071 287 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 GDI1P31150 447 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 SLC8A3P57103 927 aa14.19□□□□□ -0.14
CAPN1-227ENST00000533909 CT47A1Q5JQC4 288 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms