RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 TRIM74Q86UV6 250 aa15.58■□□□□ 0.09
NXF1-213ENST00000532297 TRIM73Q86UV7 250 aa15.58■□□□□ 0.09
NXF1-213ENST00000532297 MCF2L2Q86YR7 1114 aa15.58■□□□□ 0.09
NXF1-213ENST00000532297 FNBP1Q96RU3 617 aa15.58■□□□□ 0.09
NXF1-213ENST00000532297 KCNK13Q9HB14 408 aa15.58■□□□□ 0.09
NXF1-213ENST00000532297 RNF146Q9NTX7 359 aa15.58■□□□□ 0.09
NXF1-213ENST00000532297 MTO1Q9Y2Z2 717 aaKnown RBP15.58■□□□□ 0.09
NXF1-213ENST00000532297 GOLGA8SH3BPF8 625 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 GOLGA8MH3BSY2 632 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 DNAJC6O75061 913 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 ATF7P17544 494 aaPredicted RBP15.58■□□□□ 0.08
NXF1-213ENST00000532297 NSFP46459 744 aaKnown RBP15.58■□□□□ 0.08
NXF1-213ENST00000532297 PRKCEQ02156 737 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 GAD2Q05329 585 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 PDIA2Q13087 525 aaKnown RBP15.58■□□□□ 0.08
NXF1-213ENST00000532297 PABPC1LQ4VXU2 614 aaKnown RBP15.58■□□□□ 0.08
NXF1-213ENST00000532297 CFAP157Q5JU67 520 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 ANKMY2Q8IV38 441 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 OR5B17Q8NGF7 314 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 KLF6Q99612 283 aaPredicted RBP15.58■□□□□ 0.08
NXF1-213ENST00000532297 TTC1Q99614 292 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 CTDP1Q9Y5B0 961 aaPredicted RBP15.58■□□□□ 0.08
NXF1-213ENST00000532297 PSME4Q14997 1843 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 STBD1O95210 358 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 BAG2O95816 211 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 ARSEP51690 589 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 GEMIN4P57678 1058 aaKnown RBP15.58■□□□□ 0.08
NXF1-213ENST00000532297 GPS1Q13098 491 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 KRT72Q14CN4 511 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 EFTUD2Q15029 972 aaKnown RBP eCLIP15.58■□□□□ 0.088e-7■■■■■ 38.2
NXF1-213ENST00000532297 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.58■□□□□ 0.08
NXF1-213ENST00000532297 CYTH2Q99418 400 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 SAE1Q9UBE0 346 aaPredicted RBP15.58■□□□□ 0.08
NXF1-213ENST00000532297 ZNF148Q9UQR1 794 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 PCDHB4Q9Y5E5 795 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 COMMD3-BMI1R4GMX3 469 aa15.58■□□□□ 0.08
NXF1-213ENST00000532297 B2RBV5 119 aa15.57■□□□□ 0.08
NXF1-213ENST00000532297 MON1BQ7L1V2 547 aa15.57■□□□□ 0.08
NXF1-213ENST00000532297 NLRX1Q86UT6 975 aa15.57■□□□□ 0.08
NXF1-213ENST00000532297 CCDC110Q8TBZ0 833 aa15.57■□□□□ 0.08
NXF1-213ENST00000532297 TMC2Q8TDI7 906 aa15.57■□□□□ 0.08
NXF1-213ENST00000532297 HAPLN3Q96S86 360 aa15.57■□□□□ 0.08
NXF1-213ENST00000532297 SSU72Q9NP77 194 aaKnown RBP15.57■□□□□ 0.08
NXF1-213ENST00000532297 NDE1Q9NXR1 346 aa15.57■□□□□ 0.08
NXF1-213ENST00000532297 H3BRJ5 948 aa15.57■□□□□ 0.08
NXF1-213ENST00000532297 FCHO1O14526 889 aa15.57■□□□□ 0.08
NXF1-213ENST00000532297 LIG4P49917 911 aa15.57■□□□□ 0.08
NXF1-213ENST00000532297 RAP1GDS1P52306 607 aa15.57■□□□□ 0.08
NXF1-213ENST00000532297 LSAMPQ13449 338 aa15.57■□□□□ 0.08
NXF1-213ENST00000532297 CCDC28BQ9BUN5 200 aa15.57■□□□□ 0.08
NXF1-213ENST00000532297 VPS11Q9H270 941 aa15.57■□□□□ 0.08
NXF1-213ENST00000532297 CENPFP49454 3210 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 ITGBL1O95965 494 aaPredicted RBP15.56■□□□□ 0.08
NXF1-213ENST00000532297 NR3C2P08235 984 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 HMGB2P26583 209 aaKnown RBP15.56■□□□□ 0.08
NXF1-213ENST00000532297 CXCL9Q07325 125 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 RIPOR1Q6ZS17 1223 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 CENPUQ71F23 418 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 MARK2Q7KZI7 788 aaKnown RBP15.56■□□□□ 0.08
NXF1-213ENST00000532297 ST13P4Q8IZP2 240 aaPredicted RBP15.56■□□□□ 0.08
NXF1-213ENST00000532297 OXNAD1Q96HP4 312 aaPredicted RBP15.56■□□□□ 0.08
NXF1-213ENST00000532297 FAM81BQ96LP2 452 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 FBXL18Q96ME1 805 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 PREBQ9HCU5 417 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 DNPEPQ9ULA0 475 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 NUB1Q9Y5A7 615 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 PCDHA10Q9Y5I2 948 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 LRRIQ4A6NIV6 560 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 F8W8V4 182 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 ATP2A1O14983 1001 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 WDR46O15213 610 aaKnown RBP15.56■□□□□ 0.08
NXF1-213ENST00000532297 ALOX15BO15296 676 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 TM9SF1O15321 606 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 RNASEH1O60930 286 aaKnown RBP15.56■□□□□ 0.08
NXF1-213ENST00000532297 DLDP09622 509 aaKnown RBP15.56■□□□□ 0.08
NXF1-213ENST00000532297 SPATA31D3P0C874 917 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 MYL2P10916 166 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 GTF2H1P32780 548 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 JAK3P52333 1124 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 ARL4CP56559 192 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 AP2B1P63010 937 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 SP2Q02086 613 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 CDC16Q13042 620 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 RASA2Q15283 850 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 SYCP2LQ5T4T6 812 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 SCARA5Q6ZMJ2 495 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 SPATA31D4Q6ZUB0 917 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 RHOT1Q8IXI2 618 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 SMC1BQ8NDV3 1235 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 OLFM3Q96PB7 478 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 TARS2Q9BW92 718 aaKnown RBP15.56■□□□□ 0.08
NXF1-213ENST00000532297 PHACTR1Q9C0D0 580 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 NMUR2Q9GZQ4 415 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 PPCSQ9HAB8 311 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 ARHGEF4Q9NR80 690 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 IL1RAPL1Q9NZN1 696 aa15.56■□□□□ 0.08
NXF1-213ENST00000532297 CIB2O75838 187 aa15.55■□□□□ 0.08
NXF1-213ENST00000532297 USP1O94782 785 aa15.55■□□□□ 0.08
NXF1-213ENST00000532297 CRABP2P29373 138 aa15.55■□□□□ 0.08
NXF1-213ENST00000532297 GNA15P30679 374 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms