RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 RFXAPO00287 272 aa20.15■□□□□ 0.82
SMPD1-205ENST00000531303 PIK3R2O00459 728 aa20.15■□□□□ 0.82
SMPD1-205ENST00000531303 TEX28O15482 410 aa20.15■□□□□ 0.82
SMPD1-205ENST00000531303 LPXNO60711 386 aa20.15■□□□□ 0.82
SMPD1-205ENST00000531303 LILRB3O75022 631 aa20.15■□□□□ 0.82
SMPD1-205ENST00000531303 BEST1O76090 585 aa20.15■□□□□ 0.82
SMPD1-205ENST00000531303 FTLP02792 175 aaPredicted RBP20.15■□□□□ 0.82
SMPD1-205ENST00000531303 CYP1A1P04798 512 aaPredicted RBP20.15■□□□□ 0.82
SMPD1-205ENST00000531303 CNPP09543 421 aaKnown RBP20.15■□□□□ 0.82
SMPD1-205ENST00000531303 IRS1P35568 1242 aa20.15■□□□□ 0.82
SMPD1-205ENST00000531303 RGS7P49802 495 aa20.15■□□□□ 0.82
SMPD1-205ENST00000531303 CACNA2D1P54289 1103 aa20.15■□□□□ 0.82
SMPD1-205ENST00000531303 MAP3K7CLP57077 242 aa20.15■□□□□ 0.82
SMPD1-205ENST00000531303 SMC1AQ14683 1233 aaKnown RBP20.15■□□□□ 0.82
SMPD1-205ENST00000531303 ACAD10Q6JQN1 1059 aa20.15■□□□□ 0.82
SMPD1-205ENST00000531303 SMARCD1Q96GM5 515 aa20.15■□□□□ 0.82
SMPD1-205ENST00000531303 DUSP16Q9BY84 665 aa20.15■□□□□ 0.82
SMPD1-205ENST00000531303 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.15■□□□□ 0.82
SMPD1-205ENST00000531303 CYTH4Q9UIA0 394 aa20.15■□□□□ 0.82
SMPD1-205ENST00000531303 SLC27A5Q9Y2P5 690 aa20.15■□□□□ 0.82
SMPD1-205ENST00000531303 REXO2Q9Y3B8 237 aaKnown RBP20.15■□□□□ 0.82
SMPD1-205ENST00000531303 WDR27A2RRH5 827 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 MTMR11A4FU01 709 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 LSM8O95777 96 aaKnown RBP20.14■□□□□ 0.81
SMPD1-205ENST00000531303 UNGP13051 313 aaPredicted RBP20.14■□□□□ 0.81
SMPD1-205ENST00000531303 NPR3P17342 541 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 GPD2P43304 727 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 MAGEA1P43355 309 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 NSFP46459 744 aaKnown RBP20.14■□□□□ 0.81
SMPD1-205ENST00000531303 BCAT1P54687 386 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 ADCY1Q08828 1119 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 BST2Q10589 180 aaKnown RBP20.14■□□□□ 0.81
SMPD1-205ENST00000531303 CAMK1Q14012 370 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 PKDCCQ504Y2 493 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 C2CD6Q53TS8 623 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 PHLDB2Q86SQ0 1253 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 SCN4BQ8IWT1 228 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 TTC9BQ8N6N2 239 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 KCNK16Q96T55 309 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 PACSIN1Q9BY11 444 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 RXFP1Q9HBX9 757 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 ST7Q9NRC1 585 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 TFR2Q9UP52 801 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 PCDHA13Q9Y5I0 950 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 ADGRG1Q9Y653 693 aa20.14■□□□□ 0.81
SMPD1-205ENST00000531303 C2orf71A6NGG8 1288 aa20.13■□□□□ 0.81
SMPD1-205ENST00000531303 RTN2O75298 545 aa20.13■□□□□ 0.81
SMPD1-205ENST00000531303 LCA5LO95447 670 aa20.13■□□□□ 0.81
SMPD1-205ENST00000531303 ABCB4P21439 1286 aa20.13■□□□□ 0.81
SMPD1-205ENST00000531303 GRIK1P39086 918 aa20.13■□□□□ 0.81
SMPD1-205ENST00000531303 NDUFV1P49821 464 aa20.13■□□□□ 0.81
SMPD1-205ENST00000531303 SLC8A3P57103 927 aa20.13■□□□□ 0.81
SMPD1-205ENST00000531303 CREMQ03060 361 aa20.13■□□□□ 0.81
SMPD1-205ENST00000531303 HS1BP3Q53T59 392 aa20.13■□□□□ 0.81
SMPD1-205ENST00000531303 CLEC20AQ6ZU45 233 aa20.13■□□□□ 0.81
SMPD1-205ENST00000531303 KIAA1328Q86T90 577 aa20.13■□□□□ 0.81
SMPD1-205ENST00000531303 MRPL43Q8N983 215 aaKnown RBP20.13■□□□□ 0.81
SMPD1-205ENST00000531303 KLHL5Q96PQ7 755 aa20.13■□□□□ 0.81
SMPD1-205ENST00000531303 SMOQ99835 787 aa20.13■□□□□ 0.81
SMPD1-205ENST00000531303 EMILIN2Q9BXX0 1053 aa20.13■□□□□ 0.81
SMPD1-205ENST00000531303 TMEM30AQ9NV96 361 aa20.13■□□□□ 0.81
SMPD1-205ENST00000531303 FNIP2Q9P278 1114 aa20.13■□□□□ 0.81
SMPD1-205ENST00000531303 NENFQ9UMX5 172 aa20.13■□□□□ 0.81
SMPD1-205ENST00000531303 LAMA3Q16787 3333 aa20.13■□□□□ 0.81
SMPD1-205ENST00000531303 FSCN2O14926 492 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 SOAT2O75908 522 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 VNN2O95498 520 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 SPATA31D3P0C874 917 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 GZMAP12544 262 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 KLRC2P26717 231 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 CDH5P33151 784 aaPredicted RBP20.12■□□□□ 0.81
SMPD1-205ENST00000531303 KRT83P78385 493 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 DUSP4Q13115 394 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 RAB33AQ14088 237 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 SDHAF4Q5VUM1 108 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 PMF1Q6P1K2 205 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 MMS22LQ6ZRQ5 1243 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 SPATA31D4Q6ZUB0 917 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 ERICH1Q86X53 443 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 GPR65Q8IYL9 337 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 SLC35F5Q8WV83 523 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 SEPT5Q99719 369 aaPredicted RBP20.12■□□□□ 0.81
SMPD1-205ENST00000531303 C11orf70Q9BRQ4 267 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 SYNCQ9H7C4 482 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 NGRNQ9NPE2 291 aaKnown RBP20.12■□□□□ 0.81
SMPD1-205ENST00000531303 CHD9Q3L8U1 2897 aa20.12■□□□□ 0.81
SMPD1-205ENST00000531303 A0A0U1RQJ8 604 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 H2AFZP0C0S5 128 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 SETSIPP0DME0 302 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 GPR15P49685 360 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 GALCP54803 685 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 CENPCQ03188 943 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 PDCLQ13371 301 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 MGAT5BQ3V5L5 792 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 CYP4A22Q5TCH4 519 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 H2AFVQ71UI9 128 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 ZMIZ2Q8NF64 920 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 ZNF461Q8TAF7 563 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 SPPL2BQ8TCT7 592 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 ATRIPQ8WXE1 791 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms