RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 ISM2Q6H9L7 571 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 RETSATQ6NUM9 610 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 RHOUQ7L0Q8 258 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 FASTKD5Q7L8L6 764 aaKnown RBP6.68□□□□□ -1.34
SQLE-203ENST00000518931 PDSS2Q86YH6 399 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 PROKR1Q8TCW9 393 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 FAM167BQ9BTA0 163 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 LRFN3Q9BTN0 628 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 ALG13Q9NP73 1137 aaKnown RBP6.68□□□□□ -1.34
SQLE-203ENST00000518931 RNF181Q9P0P0 153 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 ANKFY1Q9P2R3 1169 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 EPS15L1Q9UBC2 864 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 DKK2Q9UBU2 259 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 PCDHA6Q9UN73 950 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 CDYLQ9Y232 598 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 TMX2Q9Y320 296 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 A0A088AWK7 358 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 UNC119BA6NIH7 251 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 B3GALT2O43825 422 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 MATN4O95460 622 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 ABHD16AO95870 558 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 GYS1P13807 737 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 GLULP15104 373 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 KRT20P35900 424 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 IL12RB1P42701 662 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 ALDH5A1P51649 535 aaPredicted RBP6.67□□□□□ -1.34
SQLE-203ENST00000518931 ABHD18Q0P651 414 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 RILPL1Q5EBL4 403 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 LY6G5CQ5SRR4 150 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 KCNV1Q6PIU1 500 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 OVCH2Q7RTZ1 564 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 GALNT5Q7Z7M9 940 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 ARHGEF25Q86VW2 580 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 ANKRD18AQ8IVF6 992 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 FAM43AQ8N2R8 423 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 ZNF713Q8N859 430 aaPredicted RBP6.67□□□□□ -1.34
SQLE-203ENST00000518931 LSMEM1Q8N8F7 131 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 PDPRQ8NCN5 879 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 NSUN7Q8NE18 718 aaKnown RBP6.67□□□□□ -1.34
SQLE-203ENST00000518931 RNF31Q96EP0 1072 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 MED15Q96RN5 788 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 ADAM2Q99965 735 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 MLST8Q9BVC4 326 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 ALOXE3Q9BYJ1 711 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 DBNDD1Q9H9R9 158 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 RRN3Q9NYV6 651 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 STAP2Q9UGK3 403 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 XPO7Q9UIA9 1087 aaKnown RBP6.67□□□□□ -1.34
SQLE-203ENST00000518931 GJD2Q9UKL4 321 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 ZDHHC8Q9ULC8 765 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 IKBKGQ9Y6K9 419 aa6.67□□□□□ -1.34
SQLE-203ENST00000518931 POLR2AP24928 1970 aaKnown RBP6.66□□□□□ -1.34
SQLE-203ENST00000518931 MARCH11A6NNE9 402 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 ZNF785A8K8V0 405 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 TUSC2O75896 110 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 CDKL5O76039 1030 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 ADH4P08319 380 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 HOXD12P35452 270 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 CXADRP78310 365 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 MPP1Q00013 466 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 GUCY1B3Q02153 619 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 ZNF844Q08AG5 666 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 PPFIA1Q13136 1202 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 G3BP1Q13283 466 aaKnown RBP eCLIP6.66□□□□□ -1.34
SQLE-203ENST00000518931 FGL2Q14314 439 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 PLCB4Q15147 1175 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 KHDC1LQ5JSQ8 128 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 CCDC129Q6ZRS4 1044 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 USP51Q70EK9 711 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 TBC1D1Q86TI0 1168 aaPredicted RBP6.66□□□□□ -1.34
SQLE-203ENST00000518931 CFAP52Q8N1V2 620 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 BRIX1Q8TDN6 353 aaKnown RBP6.66□□□□□ -1.34
SQLE-203ENST00000518931 ZFPM2Q8WW38 1151 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 SCAMP4Q969E2 229 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 NACC2Q96BF6 587 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 MTFMTQ96DP5 389 aaKnown RBP6.66□□□□□ -1.34
SQLE-203ENST00000518931 BOD1Q96IK1 185 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 ZMAT2Q96NC0 199 aaKnown RBP6.66□□□□□ -1.34
SQLE-203ENST00000518931 SEC62Q99442 399 aaKnown RBP6.66□□□□□ -1.34
SQLE-203ENST00000518931 CENPOQ9BU64 300 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 MYLK2Q9H1R3 596 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 AGO4Q9HCK5 861 aaKnown RBP6.66□□□□□ -1.34
SQLE-203ENST00000518931 SARS2Q9NP81 518 aaKnown RBP6.66□□□□□ -1.34
SQLE-203ENST00000518931 RLIMQ9NVW2 624 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 ARGLU1Q9NWB6 273 aaPredicted RBP6.66□□□□□ -1.34
SQLE-203ENST00000518931 VSX1Q9NZR4 365 aaPredicted RBP6.66□□□□□ -1.34
SQLE-203ENST00000518931 DDX20Q9UHI6 824 aaKnown RBP6.66□□□□□ -1.34
SQLE-203ENST00000518931 CPA4Q9UI42 421 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 LRCH1Q9Y2L9 728 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 HS3ST4Q9Y661 456 aa6.66□□□□□ -1.34
SQLE-203ENST00000518931 TRIM64A6NGJ6 449 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 TRIM64BA6NI03 449 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 E9PLN8 166 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 NCAM2O15394 837 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 RARBP10826 455 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 RPL17P18621 184 aaKnown RBP6.65□□□□□ -1.34
SQLE-203ENST00000518931 HDCP19113 662 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 CHKAP35790 457 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 GDF5P43026 501 aa6.65□□□□□ -1.34
SQLE-203ENST00000518931 ZNF135P52742 658 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms