RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 COL8A1P27658 744 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 CASRP41180 1078 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 KIR2DL1P43626 348 aaPredicted RBP8.32□□□□□ -1.08
CLDND1-229ENST00000513988 CSNK1EP49674 416 aaKnown RBP8.32□□□□□ -1.08
CLDND1-229ENST00000513988 OXCT1P55809 520 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 PTENP60484 403 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 IL9RQ01113 521 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 USP4Q13107 963 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 AP3B2Q13367 1082 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 VEPH1Q14D04 833 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 TAF12Q16514 161 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 AMHR2Q16671 573 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 KIF19Q2TAC6 998 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 PLA2G4FQ68DD2 849 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 NFXL1Q6ZNB6 911 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 CYB5R4Q7L1T6 521 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 SFTPA1Q8IWL2 248 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 EFCAB13Q8IY85 973 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 EXOC8Q8IYI6 725 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 BEST2Q8NFU1 509 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 CTCFLQ8NI51 663 aaPredicted RBP8.32□□□□□ -1.08
CLDND1-229ENST00000513988 ZNF564Q8TBZ8 553 aaPredicted RBP8.32□□□□□ -1.08
CLDND1-229ENST00000513988 SSC4DQ8WTU2 575 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 TCP11Q8WWU5 503 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 IGSF8Q969P0 613 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 YTHDC1Q96MU7 727 aaKnown RBP8.32□□□□□ -1.08
CLDND1-229ENST00000513988 LZTS2Q9BRK4 669 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 CRISPLD1Q9H336 500 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 GOLGA2P5Q9HBQ8 144 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 PLAAQ9Y263 795 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 SLC27A5Q9Y2P5 690 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 PCDHB1Q9Y5F3 818 aa8.32□□□□□ -1.08
CLDND1-229ENST00000513988 APCP25054 2843 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 A0A1B0GUA9 196 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 H0Y8X5 98 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 LAD1O00515 517 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 LCE2BO14633 110 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 KCNK3O14649 394 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 KAT7O95251 611 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 VNN2O95498 520 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 HOXB2P14652 356 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 DDX6P26196 483 aaKnown RBP eCLIP8.31□□□□□ -1.08
CLDND1-229ENST00000513988 CD6P30203 668 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 LSSP48449 732 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 AFF3P51826 1226 aaKnown RBP8.31□□□□□ -1.08
CLDND1-229ENST00000513988 ADCY7P51828 1080 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 MFAP1P55081 439 aaKnown RBP8.31□□□□□ -1.08
CLDND1-229ENST00000513988 MBTD1Q05BQ5 628 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 ILKQ13418 452 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 ZNF268Q14587 947 aaPredicted RBP8.31□□□□□ -1.08
CLDND1-229ENST00000513988 TEAD4Q15561 434 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 IMMTQ16891 758 aaKnown RBP8.31□□□□□ -1.08
CLDND1-229ENST00000513988 PRR16Q569H4 304 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 GLRA4Q5JXX5 417 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 DCAF12L1Q5VU92 463 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 TRMT11Q7Z4G4 463 aaKnown RBP8.31□□□□□ -1.08
CLDND1-229ENST00000513988 FERMT3Q86UX7 667 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 ATCAYQ86WG3 371 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 TEX2Q8IWB9 1127 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 APPL2Q8NEU8 664 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 RFFLQ8WZ73 363 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 CCNL2Q96S94 520 aaPredicted RBP8.31□□□□□ -1.08
CLDND1-229ENST00000513988 PNKPQ96T60 521 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 GPR174Q9BXC1 333 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 POLR1BQ9H9Y6 1135 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 SENP2Q9HC62 589 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 RIC8AQ9NPQ8 531 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 CD93Q9NPY3 652 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 ASCL3Q9NQ33 180 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 DKK3Q9UBP4 350 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 EIF2B4Q9UI10 523 aaKnown RBP8.31□□□□□ -1.08
CLDND1-229ENST00000513988 ANKRD6Q9Y2G4 727 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 NUB1Q9Y5A7 615 aa8.31□□□□□ -1.08
CLDND1-229ENST00000513988 PAPSS1O43252 624 aaPredicted RBP8.3□□□□□ -1.08
CLDND1-229ENST00000513988 GAS7O60861 476 aa8.3□□□□□ -1.08
CLDND1-229ENST00000513988 DIAPH2O60879 1101 aa8.3□□□□□ -1.08
CLDND1-229ENST00000513988 SOAT2O75908 522 aa8.3□□□□□ -1.08
CLDND1-229ENST00000513988 PLEKHA8P1O95397 391 aa8.3□□□□□ -1.08
CLDND1-229ENST00000513988 MT-CO3P00414 261 aa8.3□□□□□ -1.08
CLDND1-229ENST00000513988 CYP3A4P08684 503 aa8.3□□□□□ -1.08
CLDND1-229ENST00000513988 OR4Q2P0C623 313 aa8.3□□□□□ -1.08
CLDND1-229ENST00000513988 GNAQP50148 359 aa8.3□□□□□ -1.08
CLDND1-229ENST00000513988 NPEPPSP55786 919 aa8.3□□□□□ -1.08
CLDND1-229ENST00000513988 INSM1Q01101 510 aaPredicted RBP8.3□□□□□ -1.08
CLDND1-229ENST00000513988 NMIQ13287 307 aaPredicted RBP8.3□□□□□ -1.08
CLDND1-229ENST00000513988 TFDP1Q14186 410 aa8.3□□□□□ -1.08
CLDND1-229ENST00000513988 FHL5Q5TD97 284 aa8.3□□□□□ -1.08
CLDND1-229ENST00000513988 KIAA1324Q6UXG2 1013 aaKnown RBP8.3□□□□□ -1.08
CLDND1-229ENST00000513988 ANO5Q75V66 913 aa8.3□□□□□ -1.08
CLDND1-229ENST00000513988 MIER3Q7Z3K6 550 aa8.3□□□□□ -1.08
CLDND1-229ENST00000513988 METTL3Q86U44 580 aaKnown RBP8.3□□□□□ -1.08
CLDND1-229ENST00000513988 GATAD2AQ86YP4 633 aa8.3□□□□□ -1.08
CLDND1-229ENST00000513988 CADM4Q8NFZ8 388 aa8.3□□□□□ -1.08
CLDND1-229ENST00000513988 EVI5LQ96CN4 794 aa8.3□□□□□ -1.08
CLDND1-229ENST00000513988 SGF29Q96ES7 293 aa8.3□□□□□ -1.08
CLDND1-229ENST00000513988 TOE1Q96GM8 510 aaKnown RBP8.3□□□□□ -1.08
CLDND1-229ENST00000513988 PPP1R10Q96QC0 940 aaKnown RBP8.3□□□□□ -1.08
CLDND1-229ENST00000513988 UNC45AQ9H3U1 944 aa8.3□□□□□ -1.08
CLDND1-229ENST00000513988 GEMIN8Q9NWZ8 242 aaKnown RBP8.3□□□□□ -1.08
CLDND1-229ENST00000513988 ADAMTS1Q9UHI8 967 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms