RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 ALDH1A3P47895 512 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 SOX9P48436 509 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 GCLMP48507 274 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 MXI1P50539 228 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 EPHB3P54753 998 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 ZXDBP98169 803 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 WDR72Q3MJ13 1102 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 CCDC40Q4G0X9 1142 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 ANO6Q4KMQ2 910 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 CBWD6Q4V339 395 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 SLC44A4Q53GD3 710 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 DCAF17Q5H9S7 520 aaPredicted RBP9.25□□□□□ -0.93
SNCA-211ENST00000508895 MDH1BQ5I0G3 518 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 CBWD3Q5JTY5 395 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 CBWD5Q5RIA9 395 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 GPR158Q5T848 1215 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 CYP4A22Q5TCH4 519 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 NAIF1Q69YI7 327 aaPredicted RBP9.25□□□□□ -0.93
SNCA-211ENST00000508895 FRMD5Q7Z6J6 570 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 FILIP1Q7Z7B0 1213 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 ARID3BQ8IVW6 561 aaPredicted RBP9.25□□□□□ -0.93
SNCA-211ENST00000508895 TRIM59Q8IWR1 403 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 SUGP1Q8IWZ8 645 aaKnown RBP9.25□□□□□ -0.93
SNCA-211ENST00000508895 MAML2Q8IZL2 1156 aaPredicted RBP9.25□□□□□ -0.93
SNCA-211ENST00000508895 TMEM86AQ8N2M4 240 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 TTC8Q8TAM2 541 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 SPPL2BQ8TCT7 592 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 TAS1R2Q8TE23 839 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 SMARCD2Q92925 531 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 ELSPBP1Q96BH3 223 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 CHFRQ96EP1 664 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 PCED1BQ96HM7 432 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 CNOT6LQ96LI5 555 aaKnown RBP9.25□□□□□ -0.93
SNCA-211ENST00000508895 MMS19Q96T76 1030 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 DDX23Q9BUQ8 820 aaKnown RBP9.25□□□□□ -0.93
SNCA-211ENST00000508895 SRRTQ9BXP5 876 aaKnown RBP9.25□□□□□ -0.93
SNCA-211ENST00000508895 OXCT2Q9BYC2 517 aaPredicted RBP9.25□□□□□ -0.93
SNCA-211ENST00000508895 ZNF518BQ9C0D4 1074 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 KCNH6Q9H252 994 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 ATXN3LQ9H3M9 355 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 MMRN2Q9H8L6 949 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 ARHGEF3Q9NR81 526 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 ANO10Q9NW15 660 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 GDE1Q9NZC3 331 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 ARMCX3Q9UH62 379 aaPredicted RBP9.25□□□□□ -0.93
SNCA-211ENST00000508895 MAFFQ9ULX9 164 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 ZFP37Q9Y6Q3 630 aaPredicted RBP9.25□□□□□ -0.93
SNCA-211ENST00000508895 GPR179Q6PRD1 2367 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 ZFHX4Q86UP3 3567 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 ATRXP46100 2492 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 OTOL1A6NHN0 477 aaPredicted RBP9.24□□□□□ -0.93
SNCA-211ENST00000508895 IKBKBO14920 756 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 TACC1O75410 805 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 BEST1O76090 585 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 MICAL2O94851 1124 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 STAU1O95793 577 aaKnown RBP9.24□□□□□ -0.93
SNCA-211ENST00000508895 PTPN1P18031 435 aaKnown RBP9.24□□□□□ -0.93
SNCA-211ENST00000508895 PAX3P23760 479 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 TARSP26639 723 aaKnown RBP9.24□□□□□ -0.93
SNCA-211ENST00000508895 PIK3CAP42336 1068 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 ASPAP45381 313 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 AP3M2P53677 418 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 STARD6P59095 220 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 TNK2Q07912 1038 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 BIRC3Q13489 604 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 NCOA4Q13772 614 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 SKOR2Q2VWA4 1001 aaPredicted RBP9.24□□□□□ -0.93
SNCA-211ENST00000508895 CT47A1Q5JQC4 288 aaPredicted RBP9.24□□□□□ -0.93
SNCA-211ENST00000508895 TCERG1LQ5VWI1 586 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 TXNDC8Q6A555 127 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 IQCEQ6IPM2 695 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 SCN4BQ8IWT1 228 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 CCDC105Q8IYK2 499 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 DCP1BQ8IZD4 617 aaKnown RBP9.24□□□□□ -0.93
SNCA-211ENST00000508895 ELMOD1Q8N336 334 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 ZMIZ2Q8NF64 920 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 OR6B3Q8NGW1 331 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 FAM200AQ8TCP9 573 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 WHAMMQ8TF30 809 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 NXPE3Q969Y0 559 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 CYP2S1Q96SQ9 504 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 HSD3B7Q9H2F3 369 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 TRPV4Q9HBA0 871 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 TMEM8AQ9HCN3 771 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 C2orf42Q9NWW7 574 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 HSFX1Q9UBD0 423 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 CDH9Q9ULB4 789 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 MAGED2Q9UNF1 606 aaPredicted RBP9.24□□□□□ -0.93
SNCA-211ENST00000508895 NFE2L3Q9Y4A8 694 aa9.24□□□□□ -0.93
SNCA-211ENST00000508895 DMXL1Q9Y485 3027 aa9.23□□□□□ -0.93
SNCA-211ENST00000508895 C2orf78A6NCI8 922 aa9.23□□□□□ -0.93
SNCA-211ENST00000508895 ZNF197O14709 1029 aa9.23□□□□□ -0.93
SNCA-211ENST00000508895 GALR2O43603 387 aaPredicted RBP9.23□□□□□ -0.93
SNCA-211ENST00000508895 NOL4O94818 638 aa9.23□□□□□ -0.93
SNCA-211ENST00000508895 ASS1P00966 412 aaKnown RBP9.23□□□□□ -0.93
SNCA-211ENST00000508895 CCDC192P0DO97 292 aa9.23□□□□□ -0.93
SNCA-211ENST00000508895 GDI1P31150 447 aa9.23□□□□□ -0.93
SNCA-211ENST00000508895 GNL1P36915 607 aaPredicted RBP9.23□□□□□ -0.93
SNCA-211ENST00000508895 LHX1P48742 406 aa9.23□□□□□ -0.93
SNCA-211ENST00000508895 FMO5P49326 533 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms