RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 TMIEQ8NEW7 156 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 DEPTORQ8TB45 409 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 POF1BQ8WVV4 589 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 MARS2Q96GW9 593 aaKnown RBP4.57□□□□□ -1.68
CLK1-214ENST00000496205 TNIP3Q96KP6 325 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 VKORC1Q9BQB6 163 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 CRB3Q9BUF7 120 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 ZNF287Q9HBT7 754 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 SARS2Q9NP81 518 aaKnown RBP4.57□□□□□ -1.68
CLK1-214ENST00000496205 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.57□□□□□ -1.68
CLK1-214ENST00000496205 VSX1Q9NZR4 365 aaPredicted RBP4.57□□□□□ -1.68
CLK1-214ENST00000496205 FAM30AQ9NZY2 134 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 MED16Q9Y2X0 877 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 SNX13Q9Y5W8 968 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 CDHR4A6H8M9 788 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 ISM1B1AKI9 464 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 GJB1P08034 283 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 SETSIPP0DME0 302 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 CKBP12277 381 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 HOXB6P17509 224 aaKnown RBP4.56□□□□□ -1.68
CLK1-214ENST00000496205 GPD1P21695 349 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 STT3AP46977 705 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 PSMC1P62191 440 aaKnown RBP4.56□□□□□ -1.68
CLK1-214ENST00000496205 STK3Q13188 491 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 GRAMD1BQ3KR37 738 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 FAM209BQ5JX69 171 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 TSTD2Q5T7W7 516 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 KIAA1614Q5VZ46 1190 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 C11orf87Q6NUJ2 197 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 HIBCHQ6NVY1 386 aaPredicted RBP4.56□□□□□ -1.68
CLK1-214ENST00000496205 C1orf228Q6PIY5 440 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 ZNF365Q70YC5 407 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 GRASPQ7Z6J2 395 aaPredicted RBP4.56□□□□□ -1.68
CLK1-214ENST00000496205 PEG10Q86TG7 708 aaKnown RBP4.56□□□□□ -1.68
CLK1-214ENST00000496205 Q8NA96 180 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 KBTBD7Q8WVZ9 684 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 GSTO2Q9H4Y5 243 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 SACM1LQ9NTJ5 587 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 PIH1D1Q9NWS0 290 aaKnown RBP4.56□□□□□ -1.68
CLK1-214ENST00000496205 SIDT1Q9NXL6 827 aaKnown RBP4.56□□□□□ -1.68
CLK1-214ENST00000496205 ADAM21Q9UKJ8 722 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 OGDHLQ9ULD0 1010 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 PCDHGB2Q9Y5G2 931 aa4.56□□□□□ -1.68
CLK1-214ENST00000496205 TRIM43BA6NCK2 446 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 YY2O15391 372 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 TEX33O43247 280 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 PIP5K1CO60331 668 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 ERN1O75460 977 aaKnown RBP4.55□□□□□ -1.68
CLK1-214ENST00000496205 PRKCGP05129 697 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 MTHFD1P11586 935 aaKnown RBP4.55□□□□□ -1.68
CLK1-214ENST00000496205 IL1R1P14778 569 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 PPM1AP35813 382 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 SLFN5Q08AF3 891 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 CHAF1AQ13111 956 aaPredicted RBP4.55□□□□□ -1.68
CLK1-214ENST00000496205 EIF2B5Q13144 721 aaKnown RBP4.55□□□□□ -1.68
CLK1-214ENST00000496205 DAG1Q14118 895 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 EZH2Q15910 746 aaKnown RBP4.55□□□□□ -1.68
CLK1-214ENST00000496205 NOMO2Q5JPE7 1267 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 AMIGO2Q86SJ2 522 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 COLGALT2Q8IYK4 626 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 CCDC33Q8N5R6 958 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 OR56A3Q8NH54 315 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 TFAP2BQ92481 460 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 TRIM43Q96BQ3 446 aaPredicted RBP4.55□□□□□ -1.68
CLK1-214ENST00000496205 EVI5LQ96CN4 794 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 MSLNLQ96KJ4 702 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 KLHL32Q96NJ5 620 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 TLR10Q9BXR5 811 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 PACSIN1Q9BY11 444 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 WDR12Q9GZL7 423 aaKnown RBP4.55□□□□□ -1.68
CLK1-214ENST00000496205 CERS4Q9HA82 394 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 PPCSQ9HAB8 311 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 TRMT13Q9NUP7 481 aaKnown RBP4.55□□□□□ -1.68
CLK1-214ENST00000496205 JKAMPQ9P055 326 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 AFF4Q9UHB7 1163 aaKnown RBP4.55□□□□□ -1.68
CLK1-214ENST00000496205 ZDHHC8Q9ULC8 765 aa4.55□□□□□ -1.68
CLK1-214ENST00000496205 A0A1W2PPC4 97 aa4.54□□□□□ -1.68
CLK1-214ENST00000496205 ZNF785A8K8V0 405 aa4.54□□□□□ -1.68
CLK1-214ENST00000496205 F5H423 210 aaPredicted RBP4.54□□□□□ -1.68
CLK1-214ENST00000496205 BTN3A1O00481 513 aa4.54□□□□□ -1.68
CLK1-214ENST00000496205 NBNO60934 754 aa4.54□□□□□ -1.68
CLK1-214ENST00000496205 TCEA3O75764 348 aa4.54□□□□□ -1.68
CLK1-214ENST00000496205 HAUS5O94927 633 aa4.54□□□□□ -1.68
CLK1-214ENST00000496205 AGFG2O95081 481 aa4.54□□□□□ -1.68
CLK1-214ENST00000496205 UNC5CO95185 931 aa4.54□□□□□ -1.68
CLK1-214ENST00000496205 RARBP10826 455 aa4.54□□□□□ -1.68
CLK1-214ENST00000496205 HARSP12081 509 aaKnown RBP4.54□□□□□ -1.68
CLK1-214ENST00000496205 ZNF135P52742 658 aaPredicted RBP4.54□□□□□ -1.68
CLK1-214ENST00000496205 CREMQ03060 361 aa4.54□□□□□ -1.68
CLK1-214ENST00000496205 CTBP1Q13363 440 aa4.54□□□□□ -1.68
CLK1-214ENST00000496205 BOP1Q14137 746 aaKnown RBP4.54□□□□□ -1.68
CLK1-214ENST00000496205 SLC35G1Q2M3R5 365 aa4.54□□□□□ -1.68
CLK1-214ENST00000496205 LONRF3Q496Y0 759 aa4.54□□□□□ -1.68
CLK1-214ENST00000496205 MTX3Q5HYI7 312 aa4.54□□□□□ -1.68
CLK1-214ENST00000496205 UTP14CQ5TAP6 766 aaKnown RBP4.54□□□□□ -1.68
CLK1-214ENST00000496205 IZUMO3Q5VZ72 239 aa4.54□□□□□ -1.68
CLK1-214ENST00000496205 KAZNQ674X7 775 aa4.54□□□□□ -1.68
CLK1-214ENST00000496205 VWA1Q6PCB0 445 aa4.54□□□□□ -1.68
CLK1-214ENST00000496205 DPP9Q86TI2 863 aa4.54□□□□□ -1.68
CLK1-214ENST00000496205 VGLL2Q8N8G2 317 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms