RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 CLCN5P51795 746 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 NDST1P52848 882 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 USP46P62068 366 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 INCA1Q0VD86 236 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 GRM2Q14416 872 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 ARHGAP15Q53QZ3 475 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 ASTLQ6HA08 431 aaPredicted RBP16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 FRMD5Q7Z6J6 570 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 ACOT1Q86TX2 421 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 UNC93AQ86WB7 457 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 MFSD6LQ8IWD5 586 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 TMEM105Q8N8V8 129 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 FBXL13Q8NEE6 735 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 WHAMMQ8TF30 809 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 FAXDC2Q96IV6 333 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 TNIP3Q96KP6 325 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 TWNKQ96RR1 684 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 NIF3L1Q9GZT8 377 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 CLSTN2Q9H4D0 955 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 ARHGEF3Q9NR81 526 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 CTNND2Q9UQB3 1225 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 HCN4Q9Y3Q4 1203 aa16.98■□□□□ 0.31
CTDSP1-209ENST00000488627 ZNF318Q5VUA4 2279 aa16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 BICDL2A1A5D9 508 aa16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 SHISA7A6NL88 538 aa16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 PRAMEF12O95522 483 aa16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 PSMC3P17980 439 aa16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 STX17P56962 302 aa16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 STARD6P59095 220 aa16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 PAK1Q13153 545 aa16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 ORC1Q13415 861 aa16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 SLC44A4Q53GD3 710 aa16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 DCAF17Q5H9S7 520 aaPredicted RBP16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 FUKQ8N0W3 1084 aa16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 TATDN2Q93075 761 aa16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 E2F7Q96AV8 911 aa16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 DDX23Q9BUQ8 820 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 TRMT61BQ9BVS5 477 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 TTLL2Q9BWV7 592 aa16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 IMPG2Q9BZV3 1241 aa16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 ELOVL4Q9GZR5 314 aa16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 MFSD1Q9H3U5 465 aa16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 METTL14Q9HCE5 456 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 UXTQ9UBK9 157 aaPredicted RBP16.97■□□□□ 0.31
CTDSP1-209ENST00000488627 SOBPA7XYQ1 873 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 ARNTLO00327 626 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 TRIM66O15016 1216 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 PMM2O15305 246 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 CILPO75339 1184 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 CLSTN1O94985 981 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 AOC1P19801 751 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 PFKPQ01813 784 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 FCHO2Q0JRZ9 810 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 TCERG1LQ5VWI1 586 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 TXNDC8Q6A555 127 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 PHLDB3Q6NSJ2 640 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 DENND5BQ6ZUT9 1274 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 FAM35AQ86V20 835 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 MON1AQ86VX9 555 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 CMTM8Q8IZV2 173 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 MAB21L3Q8N8X9 362 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 C12orf29Q8N999 325 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 FLCNQ8NFG4 579 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 DEPDC1BQ8WUY9 529 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 GCNAQ96QF7 691 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 KCNK16Q96T55 309 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 KCNH6Q9H252 994 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 TBC1D17Q9HA65 648 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 TRPV5Q9NQA5 729 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 OBP2AQ9NY56 170 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 ZMYM5Q9UJ78 669 aa16.96■□□□□ 0.31
CTDSP1-209ENST00000488627 CCDC130P13994 396 aa16.95■□□□□ 0.3
CTDSP1-209ENST00000488627 DDX6P26196 483 aaKnown RBP eCLIP16.95■□□□□ 0.35e-6■■■■■ 34.8
CTDSP1-209ENST00000488627 MARSP56192 900 aaKnown RBP16.95■□□□□ 0.3
CTDSP1-209ENST00000488627 CCDC150Q8NCX0 1101 aa16.95■□□□□ 0.3
CTDSP1-209ENST00000488627 ZMIZ2Q8NF64 920 aa16.95■□□□□ 0.3
CTDSP1-209ENST00000488627 SRRTQ9BXP5 876 aaKnown RBP16.95■□□□□ 0.3
CTDSP1-209ENST00000488627 SMG9Q9H0W8 520 aaKnown RBP16.95■□□□□ 0.3
CTDSP1-209ENST00000488627 IL37Q9NZH6 218 aa16.95■□□□□ 0.3
CTDSP1-209ENST00000488627 TNFRSF10BO14763 440 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 ANXA13P27216 316 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 GDI1P31150 447 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 FMO5P49326 533 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 PRKCQQ04759 706 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 MLF2Q15773 248 aaPredicted RBP16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 TRIM59Q8IWR1 403 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 MLKLQ8NB16 471 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 PRSS33Q8NF86 280 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 LMO3Q8TAP4 145 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 SLC2A14Q8TDB8 520 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 MRPS31Q92665 395 aaKnown RBP16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 DNASE1L2Q92874 299 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 USP13Q92995 863 aaPredicted RBP16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 SLC22A12Q96S37 553 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 SMOQ99835 787 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 ARID3AQ99856 593 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 NT5C1AQ9BXI3 368 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 BRD9Q9H8M2 597 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 CSNK1G1Q9HCP0 422 aa16.94■□□□□ 0.3
CTDSP1-209ENST00000488627 GCNT4Q9P109 453 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms