RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 HGSNATQ68CP4 663 aa18.76■□□□□ 0.59
SREBF1-211ENST00000476994 RSPO2Q6UXX9 243 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-211ENST00000476994 GPR149Q86SP6 731 aa18.76■□□□□ 0.59
SREBF1-211ENST00000476994 GPIHBP1Q8IV16 184 aa18.76■□□□□ 0.59
SREBF1-211ENST00000476994 CNGA4Q8IV77 575 aa18.76■□□□□ 0.59
SREBF1-211ENST00000476994 DRC7Q8IY82 874 aa18.76■□□□□ 0.59
SREBF1-211ENST00000476994 GPR65Q8IYL9 337 aa18.76■□□□□ 0.59
SREBF1-211ENST00000476994 CRYBG2Q8N1P7 616 aa18.76■□□□□ 0.59
SREBF1-211ENST00000476994 OR6B3Q8NGW1 331 aa18.76■□□□□ 0.59
SREBF1-211ENST00000476994 PPP1R9BQ96SB3 815 aa18.76■□□□□ 0.59
SREBF1-211ENST00000476994 SYT11Q9BT88 431 aa18.76■□□□□ 0.59
SREBF1-211ENST00000476994 MFSD1Q9H3U5 465 aa18.76■□□□□ 0.59
SREBF1-211ENST00000476994 CRTAC1Q9NQ79 661 aa18.76■□□□□ 0.59
SREBF1-211ENST00000476994 ABHD10Q9NUJ1 306 aa18.76■□□□□ 0.59
SREBF1-211ENST00000476994 LIMD1Q9UGP4 676 aa18.76■□□□□ 0.59
SREBF1-211ENST00000476994 A8MXQ7 604 aa18.75■□□□□ 0.59
SREBF1-211ENST00000476994 GFPT2O94808 682 aa18.75■□□□□ 0.59
SREBF1-211ENST00000476994 PAEPP09466 180 aa18.75■□□□□ 0.59
SREBF1-211ENST00000476994 ACAT1P24752 427 aaKnown RBP18.75■□□□□ 0.59
SREBF1-211ENST00000476994 PRKCIP41743 596 aa18.75■□□□□ 0.59
SREBF1-211ENST00000476994 GLUD2P49448 558 aa18.75■□□□□ 0.59
SREBF1-211ENST00000476994 MEA1Q16626 185 aa18.75■□□□□ 0.59
SREBF1-211ENST00000476994 ZNF394Q53GI3 561 aa18.75■□□□□ 0.59
SREBF1-211ENST00000476994 PRSS55Q6UWB4 352 aaPredicted RBP18.75■□□□□ 0.59
SREBF1-211ENST00000476994 METTL23Q86XA0 190 aa18.75■□□□□ 0.59
SREBF1-211ENST00000476994 OR8K1Q8NGG5 319 aa18.75■□□□□ 0.59
SREBF1-211ENST00000476994 EPS8L1Q8TE68 723 aa18.75■□□□□ 0.59
SREBF1-211ENST00000476994 TMEM176AQ96HP8 235 aa18.75■□□□□ 0.59
SREBF1-211ENST00000476994 TMEM209Q96SK2 561 aa18.75■□□□□ 0.59
SREBF1-211ENST00000476994 ACBD6Q9BR61 282 aa18.75■□□□□ 0.59
SREBF1-211ENST00000476994 NT5C1AQ9BXI3 368 aa18.75■□□□□ 0.59
SREBF1-211ENST00000476994 NUCKS1Q9H1E3 243 aaKnown RBP18.75■□□□□ 0.59
SREBF1-211ENST00000476994 SNX25Q9H3E2 840 aa18.75■□□□□ 0.59
SREBF1-211ENST00000476994 MTRRQ9UBK8 725 aa18.75■□□□□ 0.59
SREBF1-211ENST00000476994 BACE2Q9Y5Z0 518 aa18.75■□□□□ 0.59
SREBF1-211ENST00000476994 ATP2C2O75185 946 aa18.74■□□□□ 0.59
SREBF1-211ENST00000476994 GLUD1P00367 558 aa18.74■□□□□ 0.59
SREBF1-211ENST00000476994 PDGFRBP09619 1106 aa18.74■□□□□ 0.59
SREBF1-211ENST00000476994 KRT5P13647 590 aa18.74■□□□□ 0.59
SREBF1-211ENST00000476994 FERP16591 822 aa18.74■□□□□ 0.59
SREBF1-211ENST00000476994 VCPP55072 806 aaKnown RBP18.74■□□□□ 0.59
SREBF1-211ENST00000476994 INTS6LQ5JSJ4 861 aaKnown RBP18.74■□□□□ 0.59
SREBF1-211ENST00000476994 SFMBT2Q5VUG0 894 aa18.74■□□□□ 0.59
SREBF1-211ENST00000476994 ZNF280DQ6N043 979 aa18.74■□□□□ 0.59
SREBF1-211ENST00000476994 FAM171BQ6P995 826 aa18.74■□□□□ 0.59
SREBF1-211ENST00000476994 CYP26C1Q6V0L0 522 aa18.74■□□□□ 0.59
SREBF1-211ENST00000476994 ANKS3Q6ZW76 656 aa18.74■□□□□ 0.59
SREBF1-211ENST00000476994 ACOT1Q86TX2 421 aa18.74■□□□□ 0.59
SREBF1-211ENST00000476994 LRRTM3Q86VH5 581 aa18.74■□□□□ 0.59
SREBF1-211ENST00000476994 SLC47A2Q86VL8 602 aa18.74■□□□□ 0.59
SREBF1-211ENST00000476994 CEP57Q86XR8 500 aa18.74■□□□□ 0.59
SREBF1-211ENST00000476994 ZNF397Q8NF99 534 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-211ENST00000476994 RIN2Q8WYP3 895 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-211ENST00000476994 TFAP2BQ92481 460 aa18.74■□□□□ 0.59
SREBF1-211ENST00000476994 DDX1Q92499 740 aaKnown RBP18.74■□□□□ 0.59
SREBF1-211ENST00000476994 LPIN3Q9BQK8 851 aa18.74■□□□□ 0.59
SREBF1-211ENST00000476994 SYT15Q9BQS2 421 aa18.74■□□□□ 0.59
SREBF1-211ENST00000476994 NOCTQ9UK39 431 aaKnown RBP18.74■□□□□ 0.59
SREBF1-211ENST00000476994 CDH9Q9ULB4 789 aa18.74■□□□□ 0.59
SREBF1-211ENST00000476994 ADAM12O43184 909 aa18.73■□□□□ 0.59
SREBF1-211ENST00000476994 ASGR2P07307 311 aa18.73■□□□□ 0.59
SREBF1-211ENST00000476994 TPM1P09493 284 aa18.73■□□□□ 0.59
SREBF1-211ENST00000476994 PCSK1P29120 753 aa18.73■□□□□ 0.59
SREBF1-211ENST00000476994 USP8P40818 1118 aa18.73■□□□□ 0.59
SREBF1-211ENST00000476994 PSMC1P62191 440 aaKnown RBP18.73■□□□□ 0.59
SREBF1-211ENST00000476994 CREMQ03060 361 aa18.73■□□□□ 0.59
SREBF1-211ENST00000476994 PSMD5Q16401 504 aa18.73■□□□□ 0.59
SREBF1-211ENST00000476994 ASIC2Q16515 512 aa18.73■□□□□ 0.59
SREBF1-211ENST00000476994 CCDC186Q7Z3E2 898 aa18.73■□□□□ 0.59
SREBF1-211ENST00000476994 NOP9Q86U38 636 aaKnown RBP18.73■□□□□ 0.59
SREBF1-211ENST00000476994 TMEM139Q8IV31 216 aa18.73■□□□□ 0.59
SREBF1-211ENST00000476994 B3GALNT2Q8NCR0 500 aa18.73■□□□□ 0.59
SREBF1-211ENST00000476994 ATOH1Q92858 354 aaPredicted RBP18.73■□□□□ 0.59
SREBF1-211ENST00000476994 PANX2Q96RD6 677 aa18.73■□□□□ 0.59
SREBF1-211ENST00000476994 CLSTN3Q9BQT9 956 aa18.73■□□□□ 0.59
SREBF1-211ENST00000476994 ZCWPW1Q9H0M4 648 aa18.73■□□□□ 0.59
SREBF1-211ENST00000476994 RXFP1Q9HBX9 757 aa18.73■□□□□ 0.59
SREBF1-211ENST00000476994 MAN1C1Q9NR34 630 aa18.73■□□□□ 0.59
SREBF1-211ENST00000476994 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.73■□□□□ 0.59
SREBF1-211ENST00000476994 TMLHEQ9NVH6 421 aa18.73■□□□□ 0.59
SREBF1-211ENST00000476994 MYBPHLA2RUH7 354 aa18.72■□□□□ 0.59
SREBF1-211ENST00000476994 OR6C75A6NL08 312 aa18.72■□□□□ 0.59
SREBF1-211ENST00000476994 H7C4K7 107 aa18.72■□□□□ 0.59
SREBF1-211ENST00000476994 VNN2O95498 520 aa18.72■□□□□ 0.59
SREBF1-211ENST00000476994 CYP11B1P15538 503 aa18.72■□□□□ 0.59
SREBF1-211ENST00000476994 CHRNB2P17787 502 aa18.72■□□□□ 0.59
SREBF1-211ENST00000476994 PTPN1P18031 435 aaKnown RBP18.72■□□□□ 0.59
SREBF1-211ENST00000476994 CCDC173Q0VFZ6 552 aa18.72■□□□□ 0.59
SREBF1-211ENST00000476994 TCF15Q12870 199 aa18.72■□□□□ 0.59
SREBF1-211ENST00000476994 CTXN3Q4LDR2 81 aa18.72■□□□□ 0.59
SREBF1-211ENST00000476994 ARHGAP17Q68EM7 881 aa18.72■□□□□ 0.59
SREBF1-211ENST00000476994 SLC8B1Q6J4K2 584 aa18.72■□□□□ 0.59
SREBF1-211ENST00000476994 PAQR9Q6ZVX9 377 aa18.72■□□□□ 0.59
SREBF1-211ENST00000476994 THEM5Q8N1Q8 247 aa18.72■□□□□ 0.59
SREBF1-211ENST00000476994 C12orf29Q8N999 325 aa18.72■□□□□ 0.59
SREBF1-211ENST00000476994 CMASQ8NFW8 434 aaPredicted RBP18.72■□□□□ 0.59
SREBF1-211ENST00000476994 SLC20A1Q8WUM9 679 aa18.72■□□□□ 0.59
SREBF1-211ENST00000476994 ANP32BQ92688 251 aaKnown RBP18.72■□□□□ 0.59
SREBF1-211ENST00000476994 ARHGAP20Q9P2F6 1191 aa18.72■□□□□ 0.59
SREBF1-211ENST00000476994 O00370 1275 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms