RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ACCSLQ4AC99 568 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 SGO2Q562F6 1265 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 EFHC2Q5JST6 749 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 PRAMEF19Q5SWL8 479 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 CDCA2Q69YH5 1023 aaPredicted RBP7.24□□□□□ -1.25
UBR4-212ENST00000475973 MAMDC4Q6UXC1 1216 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 SLC39A5Q6ZMH5 540 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 SH2D5Q6ZV89 423 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 MIER3Q7Z3K6 550 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 ADAT2Q7Z6V5 191 aaKnown RBP7.24□□□□□ -1.25
UBR4-212ENST00000475973 CBWD2Q8IUF1 395 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 NIPA2Q8N8Q9 360 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 IL31RAQ8NI17 732 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 SYTL5Q8TDW5 730 aaPredicted RBP7.24□□□□□ -1.25
UBR4-212ENST00000475973 ZNF653Q96CK0 615 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 RMDN2Q96LZ7 410 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 NT5C1BQ96P26 610 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 ECT2Q9H8V3 914 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 KIAA1586Q9HCI6 787 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 HOMER2Q9NSB8 354 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 RNF146Q9NTX7 359 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 FGFR1OP2Q9NVK5 253 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 NOP53Q9NZM5 478 aaKnown RBP7.24□□□□□ -1.25
UBR4-212ENST00000475973 ADAM22Q9P0K1 906 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 SLC24A2Q9UI40 661 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 LNPEPQ9UIQ6 1025 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 R3HDM2Q9Y2K5 976 aaKnown RBP7.24□□□□□ -1.25
UBR4-212ENST00000475973 SIP14410 1827 aa7.24□□□□□ -1.25
UBR4-212ENST00000475973 PLXNB2O15031 1838 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 MYH11P35749 1972 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 DNAJC25-GNG10A0A024R161 153 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 A0A1W2PQ45 241 aaPredicted RBP7.23□□□□□ -1.25
UBR4-212ENST00000475973 A0A1W2PQY0 241 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 TLDC2A0PJX2 215 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 TMEM191CA6NGB0 347 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 FAM47DPA6NHR8 397 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 C2CD2LO14523 706 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 NDC80O14777 642 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 LIASO43766 372 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 SPOPO43791 374 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 EDF1O60869 148 aaKnown RBP7.23□□□□□ -1.25
UBR4-212ENST00000475973 ANP32DO95626 131 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 GAS8O95995 478 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 CCNE2O96020 404 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 PGK1P00558 417 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 C1QAP02745 245 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 VIMP08670 466 aaKnown RBP7.23□□□□□ -1.25
UBR4-212ENST00000475973 TMEM191BP0C7N4 346 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 DHRS4L1P0CG22 281 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 ZNF865P0CJ78 1059 aaPredicted RBP7.23□□□□□ -1.25
UBR4-212ENST00000475973 BRAFP15056 766 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 RRM1P23921 792 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 YWHABP31946 246 aaKnown RBP7.23□□□□□ -1.25
UBR4-212ENST00000475973 ADCYAP1R1P41586 468 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 MSH2P43246 934 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 JAK3P52333 1124 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 PTPN5P54829 565 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 TAS2R40P59535 323 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 KRT76Q01546 638 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 STRN3Q13033 797 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 MAMLD1Q13495 774 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 PDK4Q16654 411 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 UGCGQ16739 394 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 KCTD19Q17RG1 926 aaPredicted RBP7.23□□□□□ -1.25
UBR4-212ENST00000475973 TRIM60Q495X7 471 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 SLC45A4Q5BKX6 768 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 WASHC2DQ5SRD0 308 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 C1orf53Q5VUE5 145 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 ZNF746Q6NUN9 644 aaPredicted RBP7.23□□□□□ -1.25
UBR4-212ENST00000475973 ANO5Q75V66 913 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 ARMCX2Q7L311 632 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 ZBTB33Q86T24 672 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 MCF2L2Q86YR7 1114 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 RNF135Q8IUD6 432 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 RHOT1Q8IXI2 618 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 SYCP3Q8IZU3 236 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 DEPDC4Q8N2C3 294 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 AGGF1Q8N302 714 aaeCLIP7.23□□□□□ -1.257e-6■■■■□ 19.5
UBR4-212ENST00000475973 SLC35B2Q8TB61 432 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 C10orf82Q8WW14 230 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 BSNDQ8WZ55 320 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 KIFAP3Q92845 792 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 STAMBPL1Q96FJ0 436 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 BTBD6Q96KE9 485 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 IFT74Q96LB3 600 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 GLT1D1Q96MS3 346 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 TTC25Q96NG3 672 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 ZNF570Q96NI8 536 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 SELENOSQ9BQE4 189 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 TSEN34Q9BSV6 310 aaKnown RBP7.23□□□□□ -1.25
UBR4-212ENST00000475973 FRMD8P1Q9BZ68 369 aaPredicted RBP7.23□□□□□ -1.25
UBR4-212ENST00000475973 OSBPL8Q9BZF1 889 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 TRIM7Q9C029 511 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 ABHD16BQ9H3Z7 469 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 PCIF1Q9H4Z3 704 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 ACP6Q9NPH0 428 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 XPNPEP1Q9NQW7 623 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 STARD7Q9NQZ5 370 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 SAR1AQ9NR31 198 aa7.23□□□□□ -1.25
UBR4-212ENST00000475973 KANSL3Q9P2N6 904 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms