RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 SAAL1Q96ER3 474 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 CNOT6LQ96LI5 555 aaKnown RBP12.37□□□□□ -0.43
HLA-C-206ENST00000470363 FAM213AQ9BRX8 229 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 FAM126AQ9BYI3 521 aaPredicted RBP12.37□□□□□ -0.43
HLA-C-206ENST00000470363 ATXN3LQ9H3M9 355 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 TASP1Q9H6P5 420 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 DMAC2Q9NW81 257 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 DLL3Q9NYJ7 618 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 TAB2Q9NYJ8 693 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 IFNKQ9P0W0 207 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 SIX4Q9UIU6 781 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 NDRG2Q9UN36 371 aaKnown RBP12.37□□□□□ -0.43
HLA-C-206ENST00000470363 TULP1O00294 542 aaPredicted RBP12.36□□□□□ -0.43
HLA-C-206ENST00000470363 GABRDO14764 452 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 EXOC3O60645 756 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 AKAP3O75969 853 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 FGFR1OPO95684 399 aaKnown RBP12.36□□□□□ -0.43
HLA-C-206ENST00000470363 SERPINC1P01008 464 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 F11P03951 625 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 RPL13P26373 211 aaKnown RBP12.36□□□□□ -0.43
HLA-C-206ENST00000470363 SOX9P48436 509 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 NFIL3Q16649 462 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 CCDC40Q4G0X9 1142 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 TCP11X2Q5H9J9 407 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 GPR158Q5T848 1215 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 APTXQ7Z2E3 356 aaKnown RBP12.36□□□□□ -0.43
HLA-C-206ENST00000470363 FILIP1Q7Z7B0 1213 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 PDCL2Q8N4E4 241 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 GOLGA5Q8TBA6 731 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 SPPL2BQ8TCT7 592 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 ATRIPQ8WXE1 791 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 CHFRQ96EP1 664 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 MSANTD3Q96H12 275 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 FAM84AQ96KN4 292 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 CEP63Q96MT8 703 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 NAP1L5Q96NT1 182 aaPredicted RBP12.36□□□□□ -0.43
HLA-C-206ENST00000470363 VPS16Q9H269 839 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 SLITRK6Q9H5Y7 841 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 C8orf33Q9H7E9 229 aaPredicted RBP12.36□□□□□ -0.43
HLA-C-206ENST00000470363 GDAP2Q9NXN4 497 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 HSPBP1Q9NZL4 362 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 MAGEC2Q9UBF1 373 aaPredicted RBP12.36□□□□□ -0.43
HLA-C-206ENST00000470363 TSC2P49815 1807 aa12.36□□□□□ -0.43
HLA-C-206ENST00000470363 SPECC1L-ADORA2AF8WAN1 911 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 K7ESF4 209 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 EXTL3O43909 919 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 PAPSS2O95340 614 aaPredicted RBP12.35□□□□□ -0.43
HLA-C-206ENST00000470363 LDHAP00338 332 aaKnown RBP12.35□□□□□ -0.43
HLA-C-206ENST00000470363 CTHP32929 405 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 PNPLA4P41247 253 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 MTIF2P46199 727 aaKnown RBP12.35□□□□□ -0.43
HLA-C-206ENST00000470363 COPB1P53618 953 aaKnown RBP12.35□□□□□ -0.43
HLA-C-206ENST00000470363 CYP4F8P98187 520 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 MGAT5BQ3V5L5 792 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 SV2CQ496J9 727 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 ARHGAP29Q52LW3 1261 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 C1orf228Q6PIY5 440 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 RALGPS2Q86X27 583 aaPredicted RBP12.35□□□□□ -0.43
HLA-C-206ENST00000470363 METTL23Q86XA0 190 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 SLC9A9Q8IVB4 645 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 FAM114A1Q8IWE2 563 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 C12orf56Q8IXR9 622 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 CMTM8Q8IZV2 173 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 THEM5Q8N1Q8 247 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 LRRC52Q8N7C0 313 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 XXYLT1Q8NBI6 393 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 GIPC2Q8TF65 315 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 ZFYVE19Q96K21 471 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 SEPT5Q99719 369 aaPredicted RBP12.35□□□□□ -0.43
HLA-C-206ENST00000470363 FAM83CQ9BQN1 747 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 ACBD6Q9BR61 282 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 TRIM5Q9C035 493 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 XPO4Q9C0E2 1151 aaKnown RBP12.35□□□□□ -0.43
HLA-C-206ENST00000470363 C2orf42Q9NWW7 574 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 GTSE1Q9NYZ3 720 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 CGNQ9P2M7 1197 aaKnown RBP12.35□□□□□ -0.43
HLA-C-206ENST00000470363 LIMA1Q9UHB6 759 aaKnown RBP12.35□□□□□ -0.43
HLA-C-206ENST00000470363 L1RE1Q9UN81 338 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 AGAP1Q9UPQ3 857 aa12.35□□□□□ -0.43
HLA-C-206ENST00000470363 OTOL1A6NHN0 477 aaPredicted RBP12.34□□□□□ -0.43
HLA-C-206ENST00000470363 SLC38A8A6NNN8 435 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 SOBPA7XYQ1 873 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 ADCY5O95622 1261 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 ITGB3P05106 788 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 PRKCSHP14314 528 aaPredicted RBP12.34□□□□□ -0.43
HLA-C-206ENST00000470363 EEF1GP26641 437 aaKnown RBP12.34□□□□□ -0.43
HLA-C-206ENST00000470363 CDC25CP30307 473 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 POLR2BP30876 1174 aaKnown RBP12.34□□□□□ -0.43
HLA-C-206ENST00000470363 GPR15P49685 360 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 CCR3P51677 355 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 ZNF75DP51815 510 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 UBASH3AP57075 661 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 SNRPFP62306 86 aaKnown RBP12.34□□□□□ -0.43
HLA-C-206ENST00000470363 TFAMQ00059 246 aaKnown RBP12.34□□□□□ -0.43
HLA-C-206ENST00000470363 SATB1Q01826 763 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 TNK2Q07912 1038 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 CCINQ13939 588 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 SARM1Q6SZW1 724 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 OSTM1Q86WC4 334 aa12.34□□□□□ -0.43
HLA-C-206ENST00000470363 CBWD2Q8IUF1 395 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms