RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 ABL1P00519 1130 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 F11P03951 625 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 DCNP07585 359 aaKnown RBP10.84□□□□□ -0.67
CD40-204ENST00000466205 ADORA2BP29275 332 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 PAK1Q13153 545 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 MAPRE1Q15691 268 aaKnown RBP10.84□□□□□ -0.67
CD40-204ENST00000466205 TTI2Q6NXR4 508 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 TPRG1Q6ZUI0 275 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 FAM35AQ86V20 835 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 ZC3H3Q8IXZ2 948 aaKnown RBP10.84□□□□□ -0.67
CD40-204ENST00000466205 YAF2Q8IY57 180 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 C12orf29Q8N999 325 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 CCDC150Q8NCX0 1101 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 PRSS33Q8NF86 280 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 TATDN2Q93075 761 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 FUBP3Q96I24 572 aaKnown RBP eCLIP10.84□□□□□ -0.67
CD40-204ENST00000466205 LRRC3BQ96PB8 259 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 KCNK16Q96T55 309 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 ARID3AQ99856 593 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 TRMT61BQ9BVS5 477 aaKnown RBP10.84□□□□□ -0.67
CD40-204ENST00000466205 TASP1Q9H6P5 420 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 BRD9Q9H8M2 597 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 ABCB6Q9NP58 842 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 SLC2A4RGQ9NR83 387 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 RAB20Q9NX57 234 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 KIAA1468Q9P260 1216 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 WNT16Q9UBV4 365 aa10.84□□□□□ -0.67
CD40-204ENST00000466205 KMT2EQ8IZD2 1858 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 ZNF263O14978 683 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 TRIM66O15016 1216 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 BEST1O76090 585 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 FGF19O95750 216 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 PSMC3P17980 439 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 MAGEA11P43364 429 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 UBXN2BQ14CS0 331 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 MLF2Q15773 248 aaPredicted RBP10.83□□□□□ -0.68
CD40-204ENST00000466205 SLC44A4Q53GD3 710 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 ASTLQ6HA08 431 aaPredicted RBP10.83□□□□□ -0.68
CD40-204ENST00000466205 VSTM1Q6UX27 236 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 DENND5BQ6ZUT9 1274 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 FBXL13Q8NEE6 735 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 SLC2A14Q8TDB8 520 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 MRPS31Q92665 395 aaKnown RBP10.83□□□□□ -0.68
CD40-204ENST00000466205 TAF4BQ92750 862 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 TNIP3Q96KP6 325 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 IPO9Q96P70 1041 aaKnown RBP10.83□□□□□ -0.68
CD40-204ENST00000466205 CYP2S1Q96SQ9 504 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 SRRTQ9BXP5 876 aaKnown RBP10.83□□□□□ -0.68
CD40-204ENST00000466205 GPR88Q9GZN0 384 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 ELOVL4Q9GZR5 314 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 NIF3L1Q9GZT8 377 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 CLSTN2Q9H4D0 955 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 KRT82Q9NSB4 513 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 ARMCX3Q9UH62 379 aaPredicted RBP10.83□□□□□ -0.68
CD40-204ENST00000466205 CCL26Q9Y258 94 aa10.83□□□□□ -0.68
CD40-204ENST00000466205 BICDL2A1A5D9 508 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 C2orf78A6NCI8 922 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 STX10O60499 249 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 AP1G2O75843 785 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 GTF2H1P32780 548 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 AVPR1AP37288 418 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 PPP1R2P41236 205 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 SOX9P48436 509 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 MAP3K7CLP57077 242 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 WDR44Q5JSH3 913 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 TRIM68Q6AZZ1 485 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 PAQR9Q6ZVX9 377 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 FILIP1Q7Z7B0 1213 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 CMTM8Q8IZV2 173 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 FUKQ8N0W3 1084 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 ARL14EPQ8N8R7 260 aaPredicted RBP10.82□□□□□ -0.68
CD40-204ENST00000466205 SLC35C1Q96A29 364 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 SLC22A12Q96S37 553 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 BCO2Q9BYV7 579 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 GTPBP4Q9BZE4 634 aaKnown RBP10.82□□□□□ -0.68
CD40-204ENST00000466205 NUP62CLQ9H1M0 184 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 LMBRD1Q9NUN5 540 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 FAM86C1Q9NVL1 165 aa10.82□□□□□ -0.68
CD40-204ENST00000466205 UXTQ9UBK9 157 aaPredicted RBP10.82□□□□□ -0.68
CD40-204ENST00000466205 NDRG2Q9UN36 371 aaKnown RBP10.82□□□□□ -0.68
CD40-204ENST00000466205 MTF2Q9Y483 593 aaPredicted RBP10.82□□□□□ -0.68
CD40-204ENST00000466205 H0Y858 1186 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 SCAMP3O14828 347 aaKnown RBP10.81□□□□□ -0.68
CD40-204ENST00000466205 CKMP06732 381 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 FAM163BP0C2L3 166 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 AOC1P19801 751 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 FMO5P49326 533 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 SLC5A3P53794 718 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 PFKPQ01813 784 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 TNK2Q07912 1038 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 TAF10Q12962 218 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 FRMD5Q7Z6J6 570 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 MFSD6LQ8IWD5 586 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 SCAMP5Q8TAC9 235 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 RIN3Q8TB24 985 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 BPIFB1Q8TDL5 484 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 CSGALNACT1Q8TDX6 532 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 WHAMMQ8TF30 809 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 DEPDC1BQ8WUY9 529 aa10.81□□□□□ -0.68
CD40-204ENST00000466205 IRF7Q92985 503 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms