RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 KLHL11Q9NVR0 708 aa15.26■□□□□ 0.03
HDAC6-213ENST00000462730 PCYOX1Q9UHG3 505 aa15.26■□□□□ 0.03
HDAC6-213ENST00000462730 KPNA7A9QM74 516 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 RFC1P35251 1148 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-213ENST00000462730 GABRB2P47870 512 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 TAF6P49848 677 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 RAB27AP51159 221 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 DSC3Q14574 896 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 SV2CQ496J9 727 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 PPP1R26Q5T8A7 1209 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-213ENST00000462730 UNC93AQ86WB7 457 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 NIPA2Q8N8Q9 360 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 GSTCDQ8NEC7 633 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 EXD1Q8NHP7 514 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.25■□□□□ 0.03
HDAC6-213ENST00000462730 SEC14L1Q92503 715 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 RUNDC3BQ96NL0 473 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 GAD1Q99259 594 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 NEUROG2Q9H2A3 272 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 WBP1LQ9NX94 342 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 SQORQ9Y6N5 450 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 A8MXQ7 604 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 HCRTO43612 131 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 KRT1P04264 644 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 PFKMP08237 780 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 RALAP11233 206 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 IBSPP21815 317 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-213ENST00000462730 GGCXP38435 758 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 FNTAP49354 379 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 AFF1P51825 1210 aaKnown RBP15.25■□□□□ 0.03
HDAC6-213ENST00000462730 MBTPS1Q14703 1052 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 ZFYVE27Q5T4F4 411 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 AGMOQ6ZNB7 445 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 CCDC105Q8IYK2 499 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 PLCD3Q8N3E9 789 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 KBTBD7Q8WVZ9 684 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 C1orf54Q8WWF1 131 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 MCRS1Q96EZ8 462 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 ADAM2Q99965 735 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 ERP44Q9BS26 406 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 TRAIPQ9BWF2 469 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 RNF208Q9H0X6 261 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 SNX25Q9H3E2 840 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 DPEP3Q9H4B8 488 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 GDAP2Q9NXN4 497 aa15.25■□□□□ 0.03
HDAC6-213ENST00000462730 GOLGA6BA6NDN3 693 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 PI4K2BG5E9Z4 385 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 FGFR1P11362 822 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 CCL5P13501 91 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 RGS7P49802 495 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 ATP13A4Q4VNC1 1196 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 FAM102AQ5T9C2 384 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-213ENST00000462730 LRRC38Q5VT99 294 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 DUPD1Q68J44 220 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 FAM126BQ8IXS8 530 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 EMC1Q8N766 993 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 RNF169Q8NCN4 708 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 RIN2Q8WYP3 895 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-213ENST00000462730 RNF25Q96BH1 459 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-213ENST00000462730 LPIN3Q9BQK8 851 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 HEMGNQ9BXL5 484 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 OSBPL8Q9BZF1 889 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 GIT1Q9Y2X7 761 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 A0A0U1RQF3 1178 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 ARL5CA6NH57 179 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 AGPSO00116 658 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 PIK3R2O00459 728 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 ZNF623O75123 536 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 PDGFRBP09619 1106 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 LRPAP1P30533 357 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 KCNJ1P48048 391 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 CDK7P50613 346 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 SCNN1GP51170 649 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 SNX1Q13596 522 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 OR6B2Q6IFH4 312 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 MRPL10Q7Z7H8 261 aaKnown RBP15.24■□□□□ 0.03
HDAC6-213ENST00000462730 TTC30AQ86WT1 665 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 RCOR2Q8IZ40 523 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 MREGQ8N565 214 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 APPL2Q8NEU8 664 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 FNIP1Q8TF40 1166 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 RBM41Q96IZ5 413 aaKnown RBP15.24■□□□□ 0.03
HDAC6-213ENST00000462730 LRRC19Q9H756 370 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 SLC38A7Q9NVC3 462 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 CACNG4Q9UBN1 327 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 HESX1Q9UBX0 185 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 OGDHLQ9ULD0 1010 aa15.24■□□□□ 0.03
HDAC6-213ENST00000462730 E5RJQ4 531 aa15.23■□□□□ 0.03
HDAC6-213ENST00000462730 HSF2BPO75031 334 aa15.23■□□□□ 0.03
HDAC6-213ENST00000462730 THP07101 528 aa15.23■□□□□ 0.03
HDAC6-213ENST00000462730 GNL1P36915 607 aaPredicted RBP15.23■□□□□ 0.03
HDAC6-213ENST00000462730 CETN2P41208 172 aa15.23■□□□□ 0.03
HDAC6-213ENST00000462730 PKDCCQ504Y2 493 aa15.23■□□□□ 0.03
HDAC6-213ENST00000462730 ARHGAP17Q68EM7 881 aa15.23■□□□□ 0.03
HDAC6-213ENST00000462730 TXNRD3NBQ6F5E7 133 aa15.23■□□□□ 0.03
HDAC6-213ENST00000462730 FAM183BPQ6ZVS7 135 aa15.23■□□□□ 0.03
HDAC6-213ENST00000462730 ANKS1BQ7Z6G8 1248 aa15.23■□□□□ 0.03
HDAC6-213ENST00000462730 ATG4AQ8WYN0 398 aa15.23■□□□□ 0.03
HDAC6-213ENST00000462730 SLITRK1Q96PX8 696 aa15.23■□□□□ 0.03
HDAC6-213ENST00000462730 DCLK3Q9C098 648 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms