RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 NCAPG2Q86XI2 1143 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 KIAA0319LQ8IZA0 1049 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 SHCBP1Q8NEM2 672 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 MGARPQ8TDB4 240 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 MZB1Q8WU39 189 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 RTP4Q96DX8 246 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 SMC6Q96SB8 1091 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 CPXM1Q96SM3 734 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 TMEM121Q9BTD3 319 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 SDCBP2Q9H190 292 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 ASCC2Q9H1I8 757 aaPredicted RBP13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 RSAD1Q9HA92 442 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 ASNSD1Q9NWL6 643 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 POLIQ9UNA4 740 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 AGTPBP1Q9UPW5 1226 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 CSADQ9Y600 493 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 SBF1O95248 1867 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 SGK1O00141 431 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 NOP56O00567 594 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 DPYSL4O14531 572 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 CST8O60676 142 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 EDF1O60869 148 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 SPAG6O75602 509 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 ERBB2P04626 1255 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 NF2P35240 595 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 GPD2P43304 727 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 PHKA2P46019 1235 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 CTCFP49711 727 aaPredicted RBP13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 ZNF143P52747 638 aaPredicted RBP13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 IRX3P78415 501 aaPredicted RBP13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 MGAT5Q09328 741 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 PDIA2Q13087 525 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 FASTKD3Q14CZ7 662 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 NOMO1Q15155 1222 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 PKN2Q16513 984 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 DHX37Q8IY37 1157 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 ZBED8Q8IZ13 594 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 LRRC71Q8N4P6 559 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 FITM2Q8N6M3 262 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 GDAP1Q8TB36 358 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 TMEM176AQ96HP8 235 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 NCAPGQ9BPX3 1015 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 PITPNM3Q9BZ71 974 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 ELOVL4Q9GZR5 314 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 ECT2Q9H8V3 914 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 PNPLA8Q9NP80 782 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 CYLDQ9NQC7 956 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 TBK1Q9UHD2 729 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 C2CD2Q9Y426 696 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 USH1CQ9Y6N9 552 aa13.13□□□□□ -0.31
ECHDC1-209ENST00000454591 EVPLQ92817 2033 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 GPR25O00155 361 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 TM9SF1O15321 606 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 WFS1O76024 890 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 RNF8O76064 485 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 MICAL2O94851 1124 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 ZBTB7AO95365 584 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 ITGBL1O95965 494 aaPredicted RBP13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 IL1BP01584 269 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 CXCL8P10145 99 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 MAGEA6P43360 314 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 TFDP2Q14188 446 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 ZNF394Q53GI3 561 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 FAM47CQ5HY64 1035 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 ZFYVE27Q5T4F4 411 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 SCARA5Q6ZMJ2 495 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 CYP4V2Q6ZWL3 525 aaPredicted RBP13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 ECHDC2Q86YB7 292 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 ERO1BQ86YB8 467 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 RHPN2Q8IUC4 686 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 TEKT4Q8WW24 435 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 CNPY3Q9BT09 278 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 MROH8Q9H579 483 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 VPS37BQ9H9H4 285 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 IFT122Q9HBG6 1241 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 NOD2Q9HC29 1040 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 METTL5Q9NRN9 209 aaKnown RBP13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 ITGA11Q9UKX5 1188 aa13.12□□□□□ -0.31
ECHDC1-209ENST00000454591 MCM3APO60318 1980 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 RBM47A0AV96 593 aaKnown RBP13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 CFAP69A5D8W1 941 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 SPDYE5A6NIY4 337 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 ASB14A6NK59 587 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 LACTBL1A8MY62 500 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 FOXO6A8MYZ6 492 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 INO80B-WBP1J3KQ70 363 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 B4GALT5O43286 388 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 ATP2C2O75185 946 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 NFICP08651 508 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 STAG3L1P0CL83 205 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 SETSIPP0DME0 302 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 CD19P15391 556 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 MIPP30301 263 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 IREB2P48200 963 aaKnown RBP13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 PARP6Q2NL67 630 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 FAM133BQ5BKY9 247 aaKnown RBP13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 EFCAB12Q6NXP0 572 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 LCLAT1Q6UWP7 414 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 C4orf22Q6V702 233 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms