RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 CYP2F1P24903 491 aa18.2■□□□□ 0.5
PRPF40A-204ENST00000450303 LMO2P25791 158 aa18.2■□□□□ 0.5
PRPF40A-204ENST00000450303 MTIF2P46199 727 aaKnown RBP18.2■□□□□ 0.5
PRPF40A-204ENST00000450303 LHX1P48742 406 aa18.2■□□□□ 0.5
PRPF40A-204ENST00000450303 DDR2Q16832 855 aa18.2■□□□□ 0.5
PRPF40A-204ENST00000450303 ARID3BQ8IVW6 561 aaPredicted RBP18.2■□□□□ 0.5
PRPF40A-204ENST00000450303 PLEKHO2Q8TD55 490 aa18.2■□□□□ 0.5
PRPF40A-204ENST00000450303 KBTBD7Q8WVZ9 684 aa18.2■□□□□ 0.5
PRPF40A-204ENST00000450303 CNOT6LQ96LI5 555 aaKnown RBP18.2■□□□□ 0.5
PRPF40A-204ENST00000450303 MMS19Q96T76 1030 aa18.2■□□□□ 0.5
PRPF40A-204ENST00000450303 PKMYT1Q99640 499 aa18.2■□□□□ 0.5
PRPF40A-204ENST00000450303 IL21Q9HBE4 155 aa18.2■□□□□ 0.5
PRPF40A-204ENST00000450303 DLGAP2Q9P1A6 1054 aa18.2■□□□□ 0.5
PRPF40A-204ENST00000450303 MAGED2Q9UNF1 606 aaPredicted RBP18.2■□□□□ 0.5
PRPF40A-204ENST00000450303 MYBPHLA2RUH7 354 aa18.19■□□□□ 0.5
PRPF40A-204ENST00000450303 KCNJ18B7U540 433 aa18.19■□□□□ 0.5
PRPF40A-204ENST00000450303 GABRDO14764 452 aa18.19■□□□□ 0.5
PRPF40A-204ENST00000450303 AKAP3O75969 853 aa18.19■□□□□ 0.5
PRPF40A-204ENST00000450303 MARSP56192 900 aaKnown RBP18.19■□□□□ 0.5
PRPF40A-204ENST00000450303 PSMC1P62191 440 aaKnown RBP18.19■□□□□ 0.5
PRPF40A-204ENST00000450303 ENPEPQ07075 957 aa18.19■□□□□ 0.5
PRPF40A-204ENST00000450303 KCNJ12Q14500 433 aa18.19■□□□□ 0.5
PRPF40A-204ENST00000450303 NFE2Q16621 373 aaPredicted RBP18.19■□□□□ 0.5
PRPF40A-204ENST00000450303 ARHGAP15Q53QZ3 475 aa18.19■□□□□ 0.5
PRPF40A-204ENST00000450303 CDKAL1Q5VV42 579 aa18.19■□□□□ 0.5
PRPF40A-204ENST00000450303 MFSD6LQ8IWD5 586 aa18.19■□□□□ 0.5
PRPF40A-204ENST00000450303 EEF2KMTQ96G04 330 aa18.19■□□□□ 0.5
PRPF40A-204ENST00000450303 DDX23Q9BUQ8 820 aaKnown RBP18.19■□□□□ 0.5
PRPF40A-204ENST00000450303 TRPV4Q9HBA0 871 aa18.19■□□□□ 0.5
PRPF40A-204ENST00000450303 LTB4R2Q9NPC1 389 aa18.19■□□□□ 0.5
PRPF40A-204ENST00000450303 PIEZO1Q92508 2521 aa18.19■□□□□ 0.5
PRPF40A-204ENST00000450303 DENND4CQ5VZ89 1909 aa18.19■□□□□ 0.5
PRPF40A-204ENST00000450303 ZNF263O14978 683 aa18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 STX10O60499 249 aa18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 FGF19O95750 216 aa18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 PCSK1P29120 753 aa18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 TCP11X2Q5H9J9 407 aa18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 DPH6Q7L8W6 267 aa18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 SPATA2LQ8IUW3 424 aaPredicted RBP18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 YAF2Q8IY57 180 aa18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 TMC2Q8TDI7 906 aa18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 DEPDC1BQ8WUY9 529 aa18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 IRF7Q92985 503 aa18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 ELMO3Q96BJ8 720 aa18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 LRRC3BQ96PB8 259 aa18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 GCNAQ96QF7 691 aa18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 SYT15Q9BQS2 421 aa18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 MRPL45Q9BRJ2 306 aaKnown RBP18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 SMG9Q9H0W8 520 aaKnown RBP18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 ZNF638Q14966 1978 aaKnown RBP18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 NUP210Q8TEM1 1887 aaPredicted RBP18.18■□□□□ 0.5
PRPF40A-204ENST00000450303 SHISA7A6NL88 538 aa18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 DPYSL4O14531 572 aa18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 PHACTR2O75167 634 aa18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 PRKCSHP14314 528 aaPredicted RBP18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 ZNF18P17022 549 aa18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 HMGA1P17096 107 aaKnown RBP18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 TARSP26639 723 aaKnown RBP18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 CDC25CP30307 473 aa18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 VAMP7P51809 220 aa18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 MYL6P60660 151 aa18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 TRPC3Q13507 836 aa18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 FILIP1LQ4L180 1135 aa18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 HSP90AA4PQ58FG1 418 aa18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 LIMS2Q7Z4I7 341 aa18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 IRF2BP1Q8IU81 584 aa18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 SCN4BQ8IWT1 228 aa18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 SPATA18Q8TC71 538 aa18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 DNASE1L2Q92874 299 aa18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 SLC46A2Q9BY10 475 aa18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 TASP1Q9H6P5 420 aa18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 NDRG2Q9UN36 371 aaKnown RBP18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 CACNA1IQ9P0X4 2223 aa18.17■□□□□ 0.5
PRPF40A-204ENST00000450303 OBSL1O75147 1896 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 COL4A2P08572 1712 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 SLC38A8A6NNN8 435 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 LRRIQ3A6PVS8 624 aaPredicted RBP18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 PRAMEF12O95522 483 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 SERPINC1P01008 464 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 F11P03951 625 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 WARSP23381 471 aaKnown RBP18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 RPL10AP62906 217 aaKnown RBP18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 MAN2A1Q16706 1144 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 WDR72Q3MJ13 1102 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 TCERG1LQ5VWI1 586 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 FAM171BQ6P995 826 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 ZNF852Q6ZMS4 543 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 TMEM150AQ86TG1 271 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 OR6B3Q8NGW1 331 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 TTC8Q8TAM2 541 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 PARD3BQ8TEW8 1205 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 E2F7Q96AV8 911 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 PDLIM2Q96JY6 352 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 ZFYVE19Q96K21 471 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 TUBGCP2Q9BSJ2 902 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 SNX25Q9H3E2 840 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 CRTAC1Q9NQ79 661 aa18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 NXF1Q9UBU9 619 aaKnown RBP18.16■□□□□ 0.5
PRPF40A-204ENST00000450303 LIMA1Q9UHB6 759 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms