RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 HMGXB4Q9UGU5 601 aa25.18■■□□□ 1.62
VARS-217ENST00000440048 CLDN5O00501 218 aa25.17■■□□□ 1.62
VARS-217ENST00000440048 NDST1P52848 882 aa25.17■■□□□ 1.62
VARS-217ENST00000440048 NUBP1P53384 320 aa25.17■■□□□ 1.62
VARS-217ENST00000440048 VCPP55072 806 aaKnown RBP25.17■■□□□ 1.62
VARS-217ENST00000440048 VITQ6UXI7 678 aa25.17■■□□□ 1.62
VARS-217ENST00000440048 FRMD5Q7Z6J6 570 aa25.17■■□□□ 1.62
VARS-217ENST00000440048 ACOT1Q86TX2 421 aa25.17■■□□□ 1.62
VARS-217ENST00000440048 UNC93AQ86WB7 457 aa25.17■■□□□ 1.62
VARS-217ENST00000440048 SLC35C1Q96A29 364 aa25.17■■□□□ 1.62
VARS-217ENST00000440048 TRMT2BQ96GJ1 504 aaKnown RBP25.17■■□□□ 1.62
VARS-217ENST00000440048 MYRFLQ96LU7 910 aa25.17■■□□□ 1.62
VARS-217ENST00000440048 ZNF518BQ9C0D4 1074 aa25.17■■□□□ 1.62
VARS-217ENST00000440048 ELOVL4Q9GZR5 314 aa25.17■■□□□ 1.62
VARS-217ENST00000440048 TASP1Q9H6P5 420 aa25.17■■□□□ 1.62
VARS-217ENST00000440048 CYP3A43Q9HB55 503 aa25.17■■□□□ 1.62
VARS-217ENST00000440048 UXTQ9UBK9 157 aaPredicted RBP25.17■■□□□ 1.62
VARS-217ENST00000440048 ZNF638Q14966 1978 aaKnown RBP25.16■■□□□ 1.62
VARS-217ENST00000440048 NCANO14594 1321 aa25.16■■□□□ 1.62
VARS-217ENST00000440048 TRIM66O15016 1216 aa25.16■■□□□ 1.62
VARS-217ENST00000440048 NPR3P17342 541 aa25.16■■□□□ 1.62
VARS-217ENST00000440048 CACNA2D1P54289 1103 aa25.16■■□□□ 1.62
VARS-217ENST00000440048 ORC1Q13415 861 aa25.16■■□□□ 1.62
VARS-217ENST00000440048 GRM2Q14416 872 aa25.16■■□□□ 1.62
VARS-217ENST00000440048 CCDC40Q4G0X9 1142 aa25.16■■□□□ 1.62
VARS-217ENST00000440048 GPIHBP1Q8IV16 184 aa25.16■■□□□ 1.62
VARS-217ENST00000440048 ARID3BQ8IVW6 561 aaPredicted RBP25.16■■□□□ 1.62
VARS-217ENST00000440048 RSPRY1Q96DX4 576 aa25.16■■□□□ 1.62
VARS-217ENST00000440048 CEP295NLQ96MC4 621 aa25.16■■□□□ 1.62
VARS-217ENST00000440048 GBP4Q96PP9 640 aa25.16■■□□□ 1.62
VARS-217ENST00000440048 TMEM30AQ9NV96 361 aa25.16■■□□□ 1.62
VARS-217ENST00000440048 HEPACAM2A8MVW5 462 aa25.15■■□□□ 1.62
VARS-217ENST00000440048 F8VP50 259 aa25.15■■□□□ 1.62
VARS-217ENST00000440048 ANXA13P27216 316 aa25.15■■□□□ 1.62
VARS-217ENST00000440048 AVPR2P30518 371 aa25.15■■□□□ 1.62
VARS-217ENST00000440048 INCA1Q0VD86 236 aa25.15■■□□□ 1.62
VARS-217ENST00000440048 IER5LQ5T953 404 aa25.15■■□□□ 1.62
VARS-217ENST00000440048 CRYBG2Q8N1P7 616 aa25.15■■□□□ 1.62
VARS-217ENST00000440048 FLCNQ8NFG4 579 aa25.15■■□□□ 1.62
VARS-217ENST00000440048 E2F7Q96AV8 911 aa25.15■■□□□ 1.62
VARS-217ENST00000440048 C8orf48Q96LL4 319 aa25.15■■□□□ 1.62
VARS-217ENST00000440048 SLC46A2Q9BY10 475 aa25.15■■□□□ 1.62
VARS-217ENST00000440048 ARHGEF3Q9NR81 526 aa25.15■■□□□ 1.62
VARS-217ENST00000440048 COQ4Q9Y3A0 265 aa25.15■■□□□ 1.62
VARS-217ENST00000440048 ANAPC1Q9H1A4 1944 aa25.15■■□□□ 1.62
VARS-217ENST00000440048 MYH10P35580 1976 aa25.14■■□□□ 1.62
VARS-217ENST00000440048 TADA3O75528 432 aa25.14■■□□□ 1.62
VARS-217ENST00000440048 WEE1P30291 646 aa25.14■■□□□ 1.62
VARS-217ENST00000440048 PFKPQ01813 784 aa25.14■■□□□ 1.62
VARS-217ENST00000440048 CWF19L1Q69YN2 538 aaKnown RBP25.14■■□□□ 1.62
VARS-217ENST00000440048 PAQR9Q6ZVX9 377 aa25.14■■□□□ 1.62
VARS-217ENST00000440048 DEPDC1BQ8WUY9 529 aa25.14■■□□□ 1.62
VARS-217ENST00000440048 TWNKQ96RR1 684 aa25.14■■□□□ 1.62
VARS-217ENST00000440048 MED10Q9BTT4 135 aa25.14■■□□□ 1.62
VARS-217ENST00000440048 TRMT61BQ9BVS5 477 aaKnown RBP25.14■■□□□ 1.62
VARS-217ENST00000440048 ATP8B3O60423 1300 aa25.13■■□□□ 1.61
VARS-217ENST00000440048 PSMC3P17980 439 aa25.13■■□□□ 1.61
VARS-217ENST00000440048 CD58P19256 250 aa25.13■■□□□ 1.61
VARS-217ENST00000440048 DDX6P26196 483 aaKnown RBP eCLIP25.13■■□□□ 1.61
VARS-217ENST00000440048 WDR44Q5JSH3 913 aa25.13■■□□□ 1.61
VARS-217ENST00000440048 ASTLQ6HA08 431 aaPredicted RBP25.13■■□□□ 1.61
VARS-217ENST00000440048 DENND5BQ6ZUT9 1274 aa25.13■■□□□ 1.61
VARS-217ENST00000440048 FAM35AQ86V20 835 aa25.13■■□□□ 1.61
VARS-217ENST00000440048 MFSD6LQ8IWD5 586 aa25.13■■□□□ 1.61
VARS-217ENST00000440048 FUKQ8N0W3 1084 aa25.13■■□□□ 1.61
VARS-217ENST00000440048 MRPS31Q92665 395 aaKnown RBP25.13■■□□□ 1.61
VARS-217ENST00000440048 TATDN2Q93075 761 aa25.13■■□□□ 1.61
VARS-217ENST00000440048 FAXDC2Q96IV6 333 aa25.13■■□□□ 1.61
VARS-217ENST00000440048 SRRTQ9BXP5 876 aaKnown RBP25.13■■□□□ 1.61
VARS-217ENST00000440048 NUP62CLQ9H1M0 184 aa25.13■■□□□ 1.61
VARS-217ENST00000440048 ZMYM5Q9UJ78 669 aa25.13■■□□□ 1.61
VARS-217ENST00000440048 PRAMEF12O95522 483 aa25.12■■□□□ 1.61
VARS-217ENST00000440048 CCDC130P13994 396 aa25.12■■□□□ 1.61
VARS-217ENST00000440048 CLCN5P51795 746 aa25.12■■□□□ 1.61
VARS-217ENST00000440048 PTPN5P54829 565 aa25.12■■□□□ 1.61
VARS-217ENST00000440048 USP46P62068 366 aa25.12■■□□□ 1.61
VARS-217ENST00000440048 SLC44A4Q53GD3 710 aa25.12■■□□□ 1.61
VARS-217ENST00000440048 TXNDC8Q6A555 127 aa25.12■■□□□ 1.61
VARS-217ENST00000440048 CMTM8Q8IZV2 173 aa25.12■■□□□ 1.61
VARS-217ENST00000440048 MAB21L3Q8N8X9 362 aa25.12■■□□□ 1.61
VARS-217ENST00000440048 C12orf29Q8N999 325 aa25.12■■□□□ 1.61
VARS-217ENST00000440048 NT5C1AQ9BXI3 368 aa25.12■■□□□ 1.61
VARS-217ENST00000440048 IRF2BPLQ9H1B7 796 aa25.12■■□□□ 1.61
VARS-217ENST00000440048 BRD9Q9H8M2 597 aa25.12■■□□□ 1.61
VARS-217ENST00000440048 TBC1D17Q9HA65 648 aa25.12■■□□□ 1.61
VARS-217ENST00000440048 RWDD2AQ9UIY3 292 aa25.12■■□□□ 1.61
VARS-217ENST00000440048 CILPO75339 1184 aa25.11■■□□□ 1.61
VARS-217ENST00000440048 GNA14O95837 355 aa25.11■■□□□ 1.61
VARS-217ENST00000440048 GDI1P31150 447 aa25.11■■□□□ 1.61
VARS-217ENST00000440048 FMO5P49326 533 aa25.11■■□□□ 1.61
VARS-217ENST00000440048 MON1AQ86VX9 555 aa25.11■■□□□ 1.61
VARS-217ENST00000440048 TMEM105Q8N8V8 129 aa25.11■■□□□ 1.61
VARS-217ENST00000440048 MLKLQ8NB16 471 aa25.11■■□□□ 1.61
VARS-217ENST00000440048 WHAMMQ8TF30 809 aa25.11■■□□□ 1.61
VARS-217ENST00000440048 SMARCD1Q96GM5 515 aa25.11■■□□□ 1.61
VARS-217ENST00000440048 LRRC3BQ96PB8 259 aa25.11■■□□□ 1.61
VARS-217ENST00000440048 TTLL2Q9BWV7 592 aa25.11■■□□□ 1.61
VARS-217ENST00000440048 SMG9Q9H0W8 520 aaKnown RBP25.11■■□□□ 1.61
VARS-217ENST00000440048 FAM49BQ9NUQ9 324 aa25.11■■□□□ 1.61
VARS-217ENST00000440048 SOBPA7XYQ1 873 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms