RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 HMGXB4Q9UGU5 601 aa20.07■□□□□ 0.8
TRIM56-202ENST00000412507 F5P12259 2224 aa20.06■□□□□ 0.8
TRIM56-202ENST00000412507 HEPACAM2A8MVW5 462 aa20.06■□□□□ 0.8
TRIM56-202ENST00000412507 PSMC3P17980 439 aa20.06■□□□□ 0.8
TRIM56-202ENST00000412507 ANXA13P27216 316 aa20.06■□□□□ 0.8
TRIM56-202ENST00000412507 NDST1P52848 882 aa20.06■□□□□ 0.8
TRIM56-202ENST00000412507 CACNA2D1P54289 1103 aa20.06■□□□□ 0.8
TRIM56-202ENST00000412507 STX17P56962 302 aa20.06■□□□□ 0.8
TRIM56-202ENST00000412507 PFKPQ01813 784 aa20.06■□□□□ 0.8
TRIM56-202ENST00000412507 TTI2Q6NXR4 508 aa20.06■□□□□ 0.8
TRIM56-202ENST00000412507 ACOT1Q86TX2 421 aa20.06■□□□□ 0.8
TRIM56-202ENST00000412507 TMEM105Q8N8V8 129 aa20.06■□□□□ 0.8
TRIM56-202ENST00000412507 CCDC150Q8NCX0 1101 aa20.06■□□□□ 0.8
TRIM56-202ENST00000412507 TRMT2BQ96GJ1 504 aaKnown RBP20.06■□□□□ 0.8
TRIM56-202ENST00000412507 SPATA17Q96L03 361 aa20.06■□□□□ 0.8
TRIM56-202ENST00000412507 TRMT61BQ9BVS5 477 aaKnown RBP20.06■□□□□ 0.8
TRIM56-202ENST00000412507 SLC46A2Q9BY10 475 aa20.06■□□□□ 0.8
TRIM56-202ENST00000412507 TBC1D17Q9HA65 648 aa20.06■□□□□ 0.8
TRIM56-202ENST00000412507 TMEM30AQ9NV96 361 aa20.06■□□□□ 0.8
TRIM56-202ENST00000412507 UXTQ9UBK9 157 aaPredicted RBP20.06■□□□□ 0.8
TRIM56-202ENST00000412507 ARMCX3Q9UH62 379 aaPredicted RBP20.06■□□□□ 0.8
TRIM56-202ENST00000412507 F8VP50 259 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 TRIM66O15016 1216 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 PI15O43692 258 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 TADA3O75528 432 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 RFX1P22670 979 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 GDI1P31150 447 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 CLCN5P51795 746 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 CBWD6Q4V339 395 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 SLC44A4Q53GD3 710 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 CBWD3Q5JTY5 395 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 CBWD5Q5RIA9 395 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 CLEC17AQ6ZS10 378 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 FILIP1Q7Z7B0 1213 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 MFSD6LQ8IWD5 586 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 MAB21L3Q8N8X9 362 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 TRIML1Q8N9V2 468 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 FBXL13Q8NEE6 735 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 DEPDC1BQ8WUY9 529 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 E2F7Q96AV8 911 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 TNIP3Q96KP6 325 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 MYRFLQ96LU7 910 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 CEP63Q96MT8 703 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 MED10Q9BTT4 135 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 ELOVL4Q9GZR5 314 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 NIF3L1Q9GZT8 377 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 BRD9Q9H8M2 597 aa20.05■□□□□ 0.8
TRIM56-202ENST00000412507 BICDL2A1A5D9 508 aa20.04■□□□□ 0.8
TRIM56-202ENST00000412507 PRAMEF12O95522 483 aa20.04■□□□□ 0.8
TRIM56-202ENST00000412507 AOC1P19801 751 aa20.04■□□□□ 0.8
TRIM56-202ENST00000412507 PAK1Q13153 545 aa20.04■□□□□ 0.8
TRIM56-202ENST00000412507 MLF2Q15773 248 aaPredicted RBP20.04■□□□□ 0.8
TRIM56-202ENST00000412507 CCDC40Q4G0X9 1142 aa20.04■□□□□ 0.8
TRIM56-202ENST00000412507 TXNDC8Q6A555 127 aa20.04■□□□□ 0.8
TRIM56-202ENST00000412507 DENND5BQ6ZUT9 1274 aa20.04■□□□□ 0.8
TRIM56-202ENST00000412507 FAM35AQ86V20 835 aa20.04■□□□□ 0.8
TRIM56-202ENST00000412507 UNC93AQ86WB7 457 aa20.04■□□□□ 0.8
TRIM56-202ENST00000412507 MRPS31Q92665 395 aaKnown RBP20.04■□□□□ 0.8
TRIM56-202ENST00000412507 SLC35C1Q96A29 364 aa20.04■□□□□ 0.8
TRIM56-202ENST00000412507 C8orf48Q96LL4 319 aa20.04■□□□□ 0.8
TRIM56-202ENST00000412507 TWNKQ96RR1 684 aa20.04■□□□□ 0.8
TRIM56-202ENST00000412507 SMG9Q9H0W8 520 aaKnown RBP20.04■□□□□ 0.8
TRIM56-202ENST00000412507 CYP3A43Q9HB55 503 aa20.04■□□□□ 0.8
TRIM56-202ENST00000412507 METTL14Q9HCE5 456 aaKnown RBP20.04■□□□□ 0.8
TRIM56-202ENST00000412507 RAB20Q9NX57 234 aa20.04■□□□□ 0.8
TRIM56-202ENST00000412507 ARIH1Q9Y4X5 557 aaPredicted RBP20.04■□□□□ 0.8
TRIM56-202ENST00000412507 ATP8B3O60423 1300 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 DPYSL4O14531 572 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 CD58P19256 250 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 DDX6P26196 483 aaKnown RBP eCLIP20.03■□□□□ 0.83e-7■■□□□ 13.4
TRIM56-202ENST00000412507 WEE1P30291 646 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 USP46P62068 366 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 INCA1Q0VD86 236 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 PHLDB3Q6NSJ2 640 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 FOXR2Q6PJQ5 311 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 PAQR9Q6ZVX9 377 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 FRMD5Q7Z6J6 570 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 YAF2Q8IY57 180 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 CMTM8Q8IZV2 173 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 CRYBG2Q8N1P7 616 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 PRSS33Q8NF86 280 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 CEP295NLQ96MC4 621 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 LRRC3BQ96PB8 259 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 KCNH6Q9H252 994 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 CLSTN2Q9H4D0 955 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 ZMYM5Q9UJ78 669 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 CACNA1IQ9P0X4 2223 aa20.03■□□□□ 0.8
TRIM56-202ENST00000412507 CCDC130P13994 396 aa20.02■□□□□ 0.8
TRIM56-202ENST00000412507 AVPR1AP37288 418 aa20.02■□□□□ 0.8
TRIM56-202ENST00000412507 STARD6P59095 220 aa20.02■□□□□ 0.8
TRIM56-202ENST00000412507 PRKCQQ04759 706 aa20.02■□□□□ 0.8
TRIM56-202ENST00000412507 MON1AQ86VX9 555 aa20.02■□□□□ 0.8
TRIM56-202ENST00000412507 FUKQ8N0W3 1084 aa20.02■□□□□ 0.8
TRIM56-202ENST00000412507 C12orf29Q8N999 325 aa20.02■□□□□ 0.8
TRIM56-202ENST00000412507 DNASE1L2Q92874 299 aa20.02■□□□□ 0.8
TRIM56-202ENST00000412507 IRF7Q92985 503 aa20.02■□□□□ 0.8
TRIM56-202ENST00000412507 TATDN2Q93075 761 aa20.02■□□□□ 0.8
TRIM56-202ENST00000412507 SHDQ96IW2 340 aa20.02■□□□□ 0.8
TRIM56-202ENST00000412507 IPO9Q96P70 1041 aaKnown RBP20.02■□□□□ 0.8
TRIM56-202ENST00000412507 KCNK16Q96T55 309 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms