RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 PRSS29PA6NIE9 313 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 ERC2O15083 957 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 C1QL1O75973 258 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 ALDH2P05091 517 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 FOLR3P41439 243 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 HSPA2P54652 639 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 POU6F2P78424 691 aaPredicted RBP5.42□□□□□ -1.54
CLK1-203ENST00000409769 KIF22Q14807 665 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 CCDC93Q567U6 631 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 EPHA10Q5JZY3 1008 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 UTP14CQ5TAP6 766 aaKnown RBP5.42□□□□□ -1.54
CLK1-203ENST00000409769 KIAA1614Q5VZ46 1190 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 PAPD7Q5XG87 772 aaKnown RBP5.42□□□□□ -1.54
CLK1-203ENST00000409769 DENND1CQ8IV53 801 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 TBC1D15Q8TC07 691 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 SCAMP4Q969E2 229 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 MARS2Q96GW9 593 aaKnown RBP5.42□□□□□ -1.54
CLK1-203ENST00000409769 TIMP4Q99727 224 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 MRPL46Q9H2W6 279 aaKnown RBP5.42□□□□□ -1.54
CLK1-203ENST00000409769 ANLNQ9NQW6 1124 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 PNPOQ9NVS9 261 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 USP25Q9UHP3 1055 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 FEZ2Q9UHY8 353 aaPredicted RBP5.42□□□□□ -1.54
CLK1-203ENST00000409769 NEU2Q9Y3R4 380 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 KIF7Q2M1P5 1343 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 CENPJQ9HC77 1338 aaPredicted RBP5.42□□□□□ -1.54
CLK1-203ENST00000409769 AATKQ6ZMQ8 1374 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 PLEKHH1Q9ULM0 1364 aa5.42□□□□□ -1.54
CLK1-203ENST00000409769 XIRP1Q702N8 1843 aaKnown RBP5.41□□□□□ -1.54
CLK1-203ENST00000409769 NALCNQ8IZF0 1738 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 A0A088AWK7 358 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 CCDC78A2IDD5 438 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 AGFG2O95081 481 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 CHEK2O96017 543 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 GNAI3P08754 354 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 FCER1AP12319 257 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 PIK3CGP48736 1102 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 SOX10P56693 466 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 GNAI1P63096 354 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 ZNF267Q14586 743 aaPredicted RBP5.41□□□□□ -1.54
CLK1-203ENST00000409769 LRRC41Q15345 812 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 MINDY4Q4G0A6 757 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 MICALCLQ6ZW33 695 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 GLCCI1Q86VQ1 547 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 GRAMD1CQ8IYS0 662 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 SSH3Q8TE77 659 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 KLHL32Q96NJ5 620 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 CGRRF1Q99675 332 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 KLK15Q9H2R5 256 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 BRD9Q9H8M2 597 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 HSFX1Q9UBD0 423 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 GABBR1Q9UBS5 961 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 ABCF2Q9UG63 623 aa5.41□□□□□ -1.54
CLK1-203ENST00000409769 NKTRP30414 1462 aaKnown RBP5.4□□□□□ -1.54
CLK1-203ENST00000409769 A0A1W2PS29 197 aa5.4□□□□□ -1.54
CLK1-203ENST00000409769 E7ENX8 843 aa5.4□□□□□ -1.54
CLK1-203ENST00000409769 MGST3O14880 152 aa5.4□□□□□ -1.54
CLK1-203ENST00000409769 MPPED1O15442 326 aa5.4□□□□□ -1.54
CLK1-203ENST00000409769 TUSC2O75896 110 aa5.4□□□□□ -1.54
CLK1-203ENST00000409769 SRGNP10124 158 aa5.4□□□□□ -1.54
CLK1-203ENST00000409769 WT1P19544 449 aaPredicted RBP5.4□□□□□ -1.54
CLK1-203ENST00000409769 AGFG1P52594 562 aaKnown RBP5.4□□□□□ -1.54
CLK1-203ENST00000409769 TAP2Q03519 686 aa5.4□□□□□ -1.54
CLK1-203ENST00000409769 PLS1Q14651 629 aa5.4□□□□□ -1.54
CLK1-203ENST00000409769 AKNAD1Q5T1N1 836 aa5.4□□□□□ -1.54
CLK1-203ENST00000409769 KIAA0895LQ68EN5 471 aa5.4□□□□□ -1.54
CLK1-203ENST00000409769 KLHDC4Q8TBB5 520 aa5.4□□□□□ -1.54
CLK1-203ENST00000409769 SMG7Q92540 1137 aaKnown RBP5.4□□□□□ -1.54
CLK1-203ENST00000409769 DDX17Q92841 729 aaKnown RBP5.4□□□□□ -1.54
CLK1-203ENST00000409769 PRAM1Q96QH2 718 aa5.4□□□□□ -1.54
CLK1-203ENST00000409769 C1orf112Q9NSG2 853 aa5.4□□□□□ -1.54
CLK1-203ENST00000409769 STK26Q9P289 416 aa5.4□□□□□ -1.54
CLK1-203ENST00000409769 ARPP21Q9UBL0 812 aaPredicted RBP5.4□□□□□ -1.54
CLK1-203ENST00000409769 G3BP2Q9UN86 482 aaKnown RBP5.4□□□□□ -1.54
CLK1-203ENST00000409769 ENTPD2Q9Y5L3 495 aa5.4□□□□□ -1.54
CLK1-203ENST00000409769 NR2E3Q9Y5X4 410 aa5.4□□□□□ -1.54
CLK1-203ENST00000409769 TOPAZ1Q8N9V7 1692 aa5.4□□□□□ -1.55
CLK1-203ENST00000409769 RGPD8O14715 1765 aaPredicted RBP5.39□□□□□ -1.55
CLK1-203ENST00000409769 USP32Q8NFA0 1604 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 PROM1O43490 865 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 UBXN7O94888 489 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 ERBB2P04626 1255 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 GJB1P08034 283 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 RARBP10826 455 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 TMF1P82094 1093 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 PIGFQ07326 219 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 MLC1Q15049 377 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 GEN1Q17RS7 908 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 TMPRSS9Q7Z410 1059 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 CFAP52Q8N1V2 620 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 TMIEQ8NEW7 156 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 MTFMTQ96DP5 389 aaKnown RBP5.39□□□□□ -1.55
CLK1-203ENST00000409769 ACO2Q99798 780 aaKnown RBP5.39□□□□□ -1.55
CLK1-203ENST00000409769 SIK2Q9H0K1 926 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 TMEM60Q9H2L4 133 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 CTTNBP2NLQ9P2B4 639 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 KLHL42Q9P2K6 505 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 SLC45A2Q9UMX9 530 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 FMN2Q9NZ56 1722 aa5.39□□□□□ -1.55
CLK1-203ENST00000409769 CDC42BPGQ6DT37 1551 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms