RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 HECTD2Q5U5R9 776 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 ABHD17BQ5VST6 288 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 CYP26C1Q6V0L0 522 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 ZNF783Q6ZMS7 281 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 ANKRD18AQ8IVF6 992 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 CLASRPQ8N2M8 674 aaKnown RBP5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 GPR150Q8NGU9 434 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 TBC1D15Q8TC07 691 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 TNPO1Q92973 898 aaKnown RBP5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 C18orf8Q96DM3 657 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 COQ10AQ96MF6 247 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 EIF2AQ9BY44 585 aaKnown RBP5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 ALOXE3Q9BYJ1 711 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 ZNF518BQ9C0D4 1074 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 MAGEH1Q9H213 219 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 TOR3AQ9H497 397 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 MAP3K20Q9NYL2 800 aaKnown RBP5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 CTTNBP2NLQ9P2B4 639 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 GRHPRQ9UBQ7 328 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 SLC39A10Q9ULF5 831 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 CEP83Q9Y592 693 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 PAXBP1Q9Y5B6 917 aa5.83□□□□□ -1.48
HMGB1P13-201ENST00000406019 A0A1B0GVC2 190 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 E9PLN8 166 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 SYT5O00445 386 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 TBC1D4O60343 1298 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 RAMP2O60895 175 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 AGFG2O95081 481 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 GCP02774 474 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 IL1R1P14778 569 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 BDNFP23560 247 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 CREMQ03060 361 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 LMOD3Q0VAK6 560 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 SLC13A2Q13183 592 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 CCDC93Q567U6 631 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 JAKMIP3Q5VZ66 844 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 TXLNBQ8N3L3 684 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 TMIEQ8NEW7 156 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 LRIG1Q96JA1 1093 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 VKORC1Q9BQB6 163 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 REXO4Q9GZR2 422 aaKnown RBP5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 UNKLQ9H9P5 680 aaKnown RBP5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 OBP2BQ9NPH6 170 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 TM7SF3Q9NS93 570 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 RLIMQ9NVW2 624 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 PDP2Q9P2J9 529 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 PACSIN3Q9UKS6 424 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 MAN2B2Q9Y2E5 1009 aa5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.82□□□□□ -1.48
HMGB1P13-201ENST00000406019 MAST3O60307 1309 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 LGALS16A8MUM7 142 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 NCAM2O15394 837 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 THAP12O43422 761 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 GPANK1O95872 356 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 AGR2O95994 175 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 ADRA1BP35368 520 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 SERPINF1P36955 418 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 VAV2P52735 878 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 SEC24CP53992 1094 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 CTBP1Q13363 440 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 HABP2Q14520 560 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 GEN1Q17RS7 908 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 UTP14CQ5TAP6 766 aaKnown RBP5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 GGT6Q6P531 493 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 VGLL2Q8N8G2 317 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 TRIM63Q969Q1 353 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 MPP4Q96JB8 637 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 MED15Q96RN5 788 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 PNKPQ96T60 521 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 HEPHQ9BQS7 1158 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 PRDM13Q9H4Q3 707 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 SYNPO2LQ9H987 977 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 GALNT9Q9HCQ5 603 aa5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 FBXO9Q9UK97 447 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P13-201ENST00000406019 A0A087WWL8 130 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 A0A1W2PS29 197 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 MYADML2A6NDP7 307 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 MBD3L4A6NDZ8 208 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 MBD3L3A6NE82 208 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 PYCARD-AS1I3L0S3 204 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 ACKR2O00590 384 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 SUV39H1O43463 412 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 CENPBP07199 599 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 DDIT3P35638 169 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 MPLP40238 635 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 MAPK9P45984 424 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 ARL4CP56559 192 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 BLOC1S1P78537 153 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 TCF15Q12870 199 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 PTK2BQ14289 1009 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 SPARCL1Q14515 664 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 POSTNQ15063 836 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 ATP2B3Q16720 1220 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 CRB2Q5IJ48 1285 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 MZT2AQ6P582 158 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 RFX8Q6ZV50 586 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 UNC13DQ70J99 1090 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 PDSS2Q86YH6 399 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 SDR16C5Q8N3Y7 309 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms