RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 A1CFQ9NQ94 594 aaKnown RBP14.84□□□□□ -0.03
PCDHA11-201ENST00000398640 METTL5Q9NRN9 209 aaKnown RBP14.84□□□□□ -0.03
PCDHA11-201ENST00000398640 MARCOQ9UEW3 520 aaPredicted RBP14.84□□□□□ -0.03
PCDHA11-201ENST00000398640 RHBDL3P58872 404 aa14.84□□□□□ -0.03
PCDHA11-201ENST00000398640 DMC1Q14565 340 aa14.84□□□□□ -0.03
PCDHA11-201ENST00000398640 MAPRE1Q15691 268 aaKnown RBP14.84□□□□□ -0.03
PCDHA11-201ENST00000398640 FBXO32Q969P5 355 aa14.84□□□□□ -0.03
PCDHA11-201ENST00000398640 MYCBPQ99417 103 aaPredicted RBP14.84□□□□□ -0.03
PCDHA11-201ENST00000398640 NFKBIZQ9BYH8 718 aa14.84□□□□□ -0.03
PCDHA11-201ENST00000398640 MAN1C1Q9NR34 630 aa14.84□□□□□ -0.03
PCDHA11-201ENST00000398640 ASS1P00966 412 aaKnown RBP14.83□□□□□ -0.03
PCDHA11-201ENST00000398640 HLA-DRAP01903 254 aa14.83□□□□□ -0.03
PCDHA11-201ENST00000398640 CKBP12277 381 aa14.83□□□□□ -0.03
PCDHA11-201ENST00000398640 CYP11B2P19099 503 aa14.83□□□□□ -0.03
PCDHA11-201ENST00000398640 BRD2P25440 801 aaKnown RBP14.83□□□□□ -0.03
PCDHA11-201ENST00000398640 NAMPTP43490 491 aa14.83□□□□□ -0.03
PCDHA11-201ENST00000398640 LONRF1Q17RB8 773 aa14.83□□□□□ -0.03
PCDHA11-201ENST00000398640 FAM110CQ1W6H9 321 aa14.83□□□□□ -0.03
PCDHA11-201ENST00000398640 UCMAQ8WVF2 138 aa14.83□□□□□ -0.03
PCDHA11-201ENST00000398640 LRRC1Q9BTT6 524 aa14.83□□□□□ -0.03
PCDHA11-201ENST00000398640 TARS2Q9BW92 718 aaKnown RBP14.83□□□□□ -0.03
PCDHA11-201ENST00000398640 PDGFDQ9GZP0 370 aaPredicted RBP14.83□□□□□ -0.03
PCDHA11-201ENST00000398640 PCMTD2Q9NV79 361 aa14.83□□□□□ -0.03
PCDHA11-201ENST00000398640 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.83□□□□□ -0.03
PCDHA11-201ENST00000398640 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.83□□□□□ -0.03
PCDHA11-201ENST00000398640 CASTOR2A6NHX0 329 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 RNASEH1O60930 286 aaKnown RBP14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 GJB7Q6PEY0 223 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 CD302Q8IX05 232 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 COG1Q8WTW3 980 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 CHP1Q99653 195 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 STK33Q9BYT3 514 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 RIOX1Q9H6W3 641 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 ETNK1Q9HBU6 452 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 ZC3H7BQ9UGR2 993 aaKnown RBP14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 ZDHHC9Q9Y397 364 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 MYMKA6NI61 221 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 MYO1GB0I1T2 1018 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 KLRC2P26717 231 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 GTF2H1P32780 548 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 DHX34Q14147 1143 aaKnown RBP14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 MTHFD1LQ6UB35 978 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 WDR24Q96S15 920 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 IRX2Q9BZI1 471 aaPredicted RBP14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 TRABDQ9H4I3 376 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 ATP5HO75947 161 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 EGFRP00533 1210 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 ELNP15502 786 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 SLC11A2P49281 568 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 TJAP1Q5JTD0 557 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 SOCS7O14512 581 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 CAPZA2P47755 286 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 RFX3P48380 749 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 GUCY1A3Q02108 690 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 NLRP14Q86W24 1093 aa14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 ZCCHC17Q9NP64 241 aaKnown RBP14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 SPATS2LQ9NUQ6 558 aaKnown RBP14.83□□□□□ -0.04
PCDHA11-201ENST00000398640 NFKBIEO00221 500 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 MAPK9P45984 424 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 GALCP54803 685 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 UBE3AQ05086 875 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 CIPCQ9C0C6 399 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 CACNA2D2Q9NY47 1150 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 THP07101 528 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 DDX5P17844 614 aaKnown RBP14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 SOAT1P35610 550 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 ELAVL2Q12926 359 aaKnown RBP14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 GPAT2Q6NUI2 795 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 CXCL17Q6UXB2 119 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 ICA1LQ8NDH6 482 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 REPS2Q8NFH8 660 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 CHST12Q9NRB3 414 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 AGPAT5Q9NUQ2 364 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 DBR1Q9UK59 544 aaKnown RBP14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 FHOD1Q9Y613 1164 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 ZNF263O14978 683 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 MUTP22033 750 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 ARHGAP18Q8N392 663 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 ATP6V0D2Q8N8Y2 350 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 ARHGEF26Q96DR7 871 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 FAM167BQ9BTA0 163 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 CRLS1Q9UJA2 301 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 TFR2Q9UP52 801 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 MRFAP1Q9Y605 127 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 CARNS1A5YM72 827 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 EPHB3P54753 998 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 DDI1Q8WTU0 396 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 RPRD1AQ96P16 312 aaPredicted RBP14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 ADNPQ9H2P0 1102 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 CHMP2BQ9UQN3 213 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 SLC37A4O43826 429 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 AP1G2O75843 785 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 IL10P22301 178 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 ATP6V1G3Q96LB4 118 aa14.82□□□□□ -0.04
PCDHA11-201ENST00000398640 TCP11X1B4DZS4 312 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 CHRM3P20309 590 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 AVPR1AP37288 418 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 ACADSBP45954 432 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 ACTN3Q08043 901 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms