RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 TSPYL2Q9H2G4 693 aaPredicted RBP13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 MYOZ2Q9NPC6 264 aa13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 ANKRD63C9JTQ0 380 aa13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 PYGBP11216 843 aa13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 COPAP53621 1224 aa13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 YWHAHQ04917 246 aaPredicted RBP13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 POTEAQ6S8J7 498 aa13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 NIPA1Q7RTP0 329 aa13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 NRBF2Q96F24 287 aa13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 USP20Q9Y2K6 914 aa13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 USP10Q14694 798 aaKnown RBP13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 PDK1Q15118 436 aa13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 RASA2Q15283 850 aa13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 ZNF669Q96BR6 464 aaPredicted RBP13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 HAUS8Q9BT25 410 aa13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 WDR18Q9BV38 432 aa13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 TMEM120AQ9BXJ8 343 aa13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 VPS33BQ9H267 617 aa13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 LRRC19Q9H756 370 aa13.25□□□□□ -0.29
DNMT3A-204ENST00000380756 ROBO3Q96MS0 1386 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 C3orf70A6NLC5 250 aaPredicted RBP13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 MAGEB2O15479 319 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 BGNP21810 368 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 TCF7P36402 384 aaPredicted RBP13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 PRAMEP78395 509 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 MAPRE2Q15555 327 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 PREPLQ4J6C6 727 aaPredicted RBP13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 EXOC3L1Q86VI1 746 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 RASGEF1CQ8N431 466 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 ZCCHC9Q8N567 271 aaKnown RBP13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 CERS5Q8N5B7 392 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 CNPY3Q9BT09 278 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 MAGEB5Q9BZ81 275 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 IKZF4Q9H2S9 585 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 USP18Q9UMW8 372 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 ASB14A6NK59 587 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 ADAMTS3O15072 1205 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 CBX6O95503 412 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 SETSIPP0DME0 302 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 PGM5Q15124 567 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 UGP2Q16851 508 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 AGBL3Q8NEM8 1001 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 MRPL46Q9H2W6 279 aaKnown RBP13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 TASP1Q9H6P5 420 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 XRN1Q8IZH2 1706 aaKnown RBP13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 GSTA4O15217 222 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 GAS2O43903 313 aaKnown RBP13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 GJB6O95452 261 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 MTFR1Q15390 333 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 CYTH1Q15438 398 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 QPCTQ16769 361 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 GOLGA7BQ2TAP0 167 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 SWT1Q5T5J6 900 aaKnown RBP13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 CHST13Q8NET6 341 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 ORC6Q9Y5N6 252 aa13.24□□□□□ -0.29
DNMT3A-204ENST00000380756 HBP1O60381 514 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 PPP1R11O60927 126 aaPredicted RBP13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 ZNF189O75820 626 aaPredicted RBP13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 CYP1A2P05177 515 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 ELK3P41970 407 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 MMP13P45452 471 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 HSD17B4P51659 736 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 AQP5P55064 265 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 FMO1Q01740 532 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 BIRC2Q13490 618 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 SCN4BQ8IWT1 228 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 TMA16Q96EY4 203 aaKnown RBP13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 ZSCAN5DPP0CG00 497 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 MCF2P10911 925 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 VCAM1P19320 739 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 EPHB2P29323 1055 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 TBCCQ15814 346 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 DACT2Q5SW24 774 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 WDR49Q8IV35 697 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 SCUBE1Q8IWY4 988 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 KATNAL2Q8IYT4 538 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 ABI1Q8IZP0 508 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 AGAP11Q8TF27 550 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 ZNF75CPQ92670 426 aaPredicted RBP13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 PRCCQ92733 491 aaPredicted RBP13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 ART4Q93070 314 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.23□□□□□ -0.296e-7■■■■■ 47.1
DNMT3A-204ENST00000380756 ANKRD27Q96NW4 1050 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 FAM53CQ9NYF3 392 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 MAGEA13PA6NCF6 341 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 ADRB2P07550 413 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 SNHG28P0DPA3 235 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 ADRA1DP25100 572 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 KCNJ2P63252 427 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 KPNB1Q14974 876 aaKnown RBP13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 TMEM259Q4ZIN3 620 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 DCAF6Q58WW2 860 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 HABP4Q5JVS0 413 aaKnown RBP13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 LRRC57Q8N9N7 239 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 MYLK2Q9H1R3 596 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 FAM198AQ9UFP1 575 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 RPS6KL1Q9Y6S9 549 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 OPLAHO14841 1288 aa13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 MOCS2O96007 188 aaPredicted RBP13.23□□□□□ -0.29
DNMT3A-204ENST00000380756 ARPP19P56211 112 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms