RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 RHOT1Q8IXI2 618 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 ST13P5Q8NFI4 369 aaPredicted RBP6.56□□□□□ -1.36
PTPN3-202ENST00000374541 COG1Q8WTW3 980 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 EXT2Q93063 718 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 ERLEC1Q96DZ1 483 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 L3MBTL3Q96JM7 780 aaPredicted RBP6.56□□□□□ -1.36
PTPN3-202ENST00000374541 EPS8L2Q9H6S3 715 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 FAM32AQ9Y421 112 aaKnown RBP6.56□□□□□ -1.36
PTPN3-202ENST00000374541 RFX7Q2KHR2 1363 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 LRP6O75581 1613 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 CFAP69A5D8W1 941 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 A8MXQ7 604 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 H7C0S8 307 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 ARVCFO00192 962 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 CD4P01730 458 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 HARS2P49590 506 aaKnown RBP6.56□□□□□ -1.36
PTPN3-202ENST00000374541 TRAF7Q6Q0C0 670 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 KDELC2Q7Z4H8 507 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 CACUL1Q86Y37 369 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 RIBC1Q8N443 379 aaPredicted RBP6.56□□□□□ -1.36
PTPN3-202ENST00000374541 CCNYL1Q8N7R7 359 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 NEDD1Q8NHV4 660 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 EPN3Q9H201 632 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 ABHD10Q9NUJ1 306 aa6.56□□□□□ -1.36
PTPN3-202ENST00000374541 VWA5AO00534 786 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 CD58P19256 250 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 ROR1Q01973 937 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 NOL9Q5SY16 702 aaKnown RBP6.55□□□□□ -1.36
PTPN3-202ENST00000374541 RASGRP4Q8TDF6 673 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 CASP10Q92851 521 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 TRIM63Q969Q1 353 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 FAM167BQ9BTA0 163 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 ANAPC7Q9UJX3 599 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 CAMTA1Q9Y6Y1 1673 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 E5RI56 91 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 SH2B2O14492 632 aaPredicted RBP6.55□□□□□ -1.36
PTPN3-202ENST00000374541 MAFGO15525 162 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 LZTS3O60299 673 aaPredicted RBP6.55□□□□□ -1.36
PTPN3-202ENST00000374541 PCDH8O95206 1070 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 SLC9A1P19634 815 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 KCNA3P22001 575 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 KCNA1Q09470 495 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 C16orf72Q14CZ0 275 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 ADCK5Q3MIX3 580 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 PPP4R4Q6NUP7 873 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 RBBP8Q99708 897 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 MRPL1Q9BYD6 325 aaKnown RBP6.55□□□□□ -1.36
PTPN3-202ENST00000374541 BRD8Q9H0E9 1235 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 KLF15Q9UIH9 416 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 DNAJC12Q9UKB3 198 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 MTO1Q9Y2Z2 717 aaKnown RBP6.55□□□□□ -1.36
PTPN3-202ENST00000374541 PEAK1Q9H792 1746 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 C5orf58C9J3I9 102 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 ADCY6O43306 1168 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 THP07101 528 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 PCSK1P29120 753 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 CXCR5P32302 372 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 NRIP1P48552 1158 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 PFKPQ01813 784 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 NSUN2Q08J23 767 aaKnown RBP eCLIP6.55□□□□□ -1.36
PTPN3-202ENST00000374541 LRRC32Q14392 662 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 C12orf60Q5U649 245 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 BTNL9Q6UXG8 535 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 MYLIPQ8WY64 445 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 PSD3Q9NYI0 1048 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 TLR7Q9NYK1 1049 aaKnown RBP6.55□□□□□ -1.36
PTPN3-202ENST00000374541 STK39Q9UEW8 545 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 SLC26A4O43511 780 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 LGR5O75473 907 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 KLRC1P26715 233 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 RFC2P35250 354 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 DDIT3P35638 169 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 NUP62P37198 522 aaPredicted RBP6.55□□□□□ -1.36
PTPN3-202ENST00000374541 ST13P50502 369 aaKnown RBP6.55□□□□□ -1.36
PTPN3-202ENST00000374541 GIT2Q14161 759 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 EFHC2Q5JST6 749 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 RESP18Q5W5W9 173 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 C4orf22Q6V702 233 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 C3orf67Q6ZVT6 689 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 SRLQ86TD4 932 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 GAS2L3Q86XJ1 694 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 SRBD1Q8N5C6 995 aaKnown RBP6.55□□□□□ -1.36
PTPN3-202ENST00000374541 ASAP3Q8TDY4 903 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 DNAJC9Q8WXX5 260 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 GLMNQ92990 594 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 FRMD8Q9BZ67 464 aaPredicted RBP6.55□□□□□ -1.36
PTPN3-202ENST00000374541 ADNPQ9H2P0 1102 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 PCIF1Q9H4Z3 704 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 SAMSN1Q9NSI8 373 aaKnown RBP6.55□□□□□ -1.36
PTPN3-202ENST00000374541 ZSCAN9O15535 394 aaPredicted RBP6.55□□□□□ -1.36
PTPN3-202ENST00000374541 PJA2O43164 708 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 KRT14P02533 472 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 ALDH5A1P51649 535 aaPredicted RBP6.55□□□□□ -1.36
PTPN3-202ENST00000374541 ACLYP53396 1101 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 GRSF1Q12849 480 aaKnown RBP eCLIP6.55□□□□□ -1.36
PTPN3-202ENST00000374541 RESTQ13127 1097 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 CYTH1Q15438 398 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 KBTBD12Q3ZCT8 623 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 KSR1Q8IVT5 923 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 PPM1NQ8N819 430 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms