RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 VPS33AQ96AX1 596 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 TEX13BQ9BXU2 312 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 RMND5AQ9H871 391 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 KLHL11Q9NVR0 708 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 TOPBP1Q92547 1522 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 PNMA6FA0A0J9YX94 578 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 ATP13A5Q4VNC0 1218 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 PERM1Q5SV97 790 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 AGAP9Q5VTM2 703 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 CRELD2Q6UXH1 353 aaPredicted RBP15.81■□□□□ 0.12
COL5A1-201ENST00000371817 EIF3LQ9Y262 564 aaKnown RBP15.81■□□□□ 0.12
COL5A1-201ENST00000371817 ZNF682O95780 498 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 SLC27A3Q5K4L6 730 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 OTUD3Q5T2D3 398 aaPredicted RBP15.81■□□□□ 0.12
COL5A1-201ENST00000371817 DSTYKQ6XUX3 929 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 PEG10Q86TG7 708 aaKnown RBP15.81■□□□□ 0.12
COL5A1-201ENST00000371817 LIN7AO14910 233 aaPredicted RBP15.81■□□□□ 0.12
COL5A1-201ENST00000371817 AREL1O15033 823 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 ORC2Q13416 577 aaPredicted RBP15.81■□□□□ 0.12
COL5A1-201ENST00000371817 TMC4Q7Z404 712 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 KLHL1Q9NR64 748 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 WHRNQ9P202 907 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 EDRF1Q3B7T1 1238 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 DCAF4L1Q3SXM0 396 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 SGO1Q5FBB7 561 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 C4orf22Q6V702 233 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 SULF1Q8IWU6 871 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 WDR48Q8TAF3 677 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 UTP15Q8TED0 518 aaKnown RBP15.81■□□□□ 0.12
COL5A1-201ENST00000371817 AIFM3Q96NN9 605 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 CRNNQ9UBG3 495 aaPredicted RBP15.81■□□□□ 0.12
COL5A1-201ENST00000371817 GTF2A1LQ9UNN4 478 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 GSTK1Q9Y2Q3 226 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 UBE2QL1A1L167 161 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 RAG1P15918 1043 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 CCNCP24863 283 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 TPI1P60174 286 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 ALFQ53S48 1182 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 MARK2Q7KZI7 788 aaKnown RBP15.8■□□□□ 0.12
COL5A1-201ENST00000371817 CENPIQ92674 756 aaPredicted RBP15.8■□□□□ 0.12
COL5A1-201ENST00000371817 SPASTQ9UBP0 616 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 HEATR9A2RTY3 570 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 SERPIND1P05546 499 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 NPEPPSP55786 919 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 TMEM26Q6ZUK4 368 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 FAM9CQ8IZT9 166 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 SLC25A41Q8N5S1 370 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 MCPH1Q8NEM0 835 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 INTS2Q9H0H0 1204 aaKnown RBP15.8■□□□□ 0.12
COL5A1-201ENST00000371817 TMCO1Q9UM00 188 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 SLCO1B7G3V0H7 640 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 PHKA1P46020 1223 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 ANXA11P50995 505 aaKnown RBP15.8■□□□□ 0.12
COL5A1-201ENST00000371817 CENPCQ03188 943 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 CCNIQ14094 377 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 TSPAN14Q8NG11 270 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 GRPEL2Q8TAA5 225 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 EIF4G3O43432 1585 aaKnown RBP15.8■□□□□ 0.12
COL5A1-201ENST00000371817 ZNF806P0C7X5 589 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 CNTN1Q12860 1018 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 FUKQ8N0W3 1084 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 PSMA8Q8TAA3 256 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 SLC52A2Q9HAB3 445 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 HMGXB3Q12766 1538 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 NNMTP40261 264 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 PTK6Q13882 451 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 GALNTL6Q49A17 601 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 PDPK2PQ6A1A2 396 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 REXO1L1PQ8IX06 675 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 RNPEPL1Q9HAU8 725 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 CHI3L1P36222 383 aaPredicted RBP15.8■□□□□ 0.12
COL5A1-201ENST00000371817 ALDH5A1P51649 535 aaPredicted RBP15.8■□□□□ 0.12
COL5A1-201ENST00000371817 TAF5Q15542 800 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 MACC1Q6ZN28 852 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 COA7Q96BR5 231 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 KLF6Q99612 283 aaPredicted RBP15.8■□□□□ 0.12
COL5A1-201ENST00000371817 PLEKHA5Q9HAU0 1116 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 PARNO95453 639 aaKnown RBP15.8■□□□□ 0.12
COL5A1-201ENST00000371817 CDC25CP30307 473 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 EIF3MQ7L2H7 374 aaKnown RBP15.8■□□□□ 0.12
COL5A1-201ENST00000371817 NMRK1Q9NWW6 199 aa15.8■□□□□ 0.12
COL5A1-201ENST00000371817 EMSYQ7Z589 1322 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 ALOX15P16050 662 aaPredicted RBP15.79■□□□□ 0.12
COL5A1-201ENST00000371817 GTF2H1P32780 548 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 EIF2S3P41091 472 aaKnown RBP15.79■□□□□ 0.12
COL5A1-201ENST00000371817 PSMD4P55036 377 aaKnown RBP15.79■□□□□ 0.12
COL5A1-201ENST00000371817 SGF29Q96ES7 293 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 FARP1Q9Y4F1 1045 aaPredicted RBP15.79■□□□□ 0.12
COL5A1-201ENST00000371817 EDC4Q6P2E9 1401 aaKnown RBP15.79■□□□□ 0.12
COL5A1-201ENST00000371817 NR5A2O00482 541 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 MYL12BO14950 172 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 ZNF846Q147U1 533 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 L2HGDHQ9H9P8 463 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 EXTL3O43909 919 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 PTPN7P35236 360 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 GPC3P51654 580 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 MAPK7Q13164 816 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 PGBD2Q6P3X8 592 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 PIK3C3Q8NEB9 887 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 CASKIN2Q8WXE0 1202 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms