RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 ZNF438Q7Z4V0 828 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 GLYCTKQ8IVS8 523 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 CCDC13Q8IYE1 715 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 RCOR2Q8IZ40 523 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 ZSCAN1Q8NBB4 408 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 TMA16Q96EY4 203 aaKnown RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 TSPAN17Q96FV3 270 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 DDX23Q9BUQ8 820 aaKnown RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 RBSNQ9H1K0 784 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 RNPEPQ9H4A4 650 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 CNOT8Q9UFF9 292 aaKnown RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.67□□□□□ -1.02
SSR2-202ENST00000368311 BCAP29Q9UHQ4 241 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 SLC30A1Q9Y6M5 507 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 V9GYY5 206 aaPredicted RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 ADGRA3Q8IWK6 1321 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 GOLGA8TH3BQL2 631 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 I3L4J1 428 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 GRM6O15303 877 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 NMT1P30419 496 aaKnown RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 SYDE1Q6ZW31 735 aaPredicted RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 FRA10AC1Q70Z53 315 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 ECHDC2Q86YB7 292 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 AHCYL2Q96HN2 611 aaKnown RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 HSFY1Q96LI6 401 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 TBCBQ99426 244 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 TRMT61BQ9BVS5 477 aaKnown RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 FBXO2Q9UK22 296 aaPredicted RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 LRRD1A4D1F6 860 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 ZNF862O60290 1169 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 MYO1DO94832 1006 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 GLI1P08151 1106 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 SYPP08247 313 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 NCAM1P13591 858 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 MLH1P40692 756 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 BLKP51451 505 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 ERVK-21P61565 698 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 FYB2Q5VWT5 728 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 CARNMT1Q8N4J0 409 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 KCTD13Q8WZ19 329 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 GAD1Q99259 594 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 NKX2-4Q9H2Z4 354 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 OGDHLQ9ULD0 1010 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 C3orf70A6NLC5 250 aaPredicted RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 LGALS16A8MUM7 142 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 CEP104O60308 925 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 MTA2O94776 668 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 RGS4P49798 205 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 THOP1P52888 689 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 NPEPPSP55786 919 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 SLC20A2Q08357 652 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 UGP2Q16851 508 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 PPP6R3Q5H9R7 873 aaPredicted RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 MDH1BQ5I0G3 518 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 CHRDL2Q6WN34 429 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.67□□□□□ -1.02
SSR2-202ENST00000368311 RNF10Q8N5U6 811 aaKnown RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 TSTD1Q8NFU3 115 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 CXorf40AQ8TE69 158 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 TRIB2Q92519 343 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 SYN2Q92777 582 aaPredicted RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 AGXT2Q9BYV1 514 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 PKD2L2Q9NZM6 624 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 KIAA1522Q9P206 1035 aaPredicted RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 DEC1Q9P2X7 70 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 RAD54BQ9Y620 910 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 TMX2-CTNND1H3BSU7 103 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 ATP1A1P05023 1023 aaKnown RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 HIST1H2AGP0C0S8 130 aaPredicted RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 HIST1H2ADP20671 130 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 SNRPD1P62314 119 aaKnown RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 GPR65Q8IYL9 337 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 ZNF333Q96JL9 665 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 HIST1H2AHQ96KK5 128 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 RAB3IPQ96QF0 476 aaPredicted RBP8.67□□□□□ -1.02
SSR2-202ENST00000368311 HIST1H2AJQ99878 128 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 H2AFJQ9BTM1 129 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 AGPAT3Q9NRZ7 376 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 VPS28Q9UK41 221 aa8.67□□□□□ -1.02
SSR2-202ENST00000368311 RBM47A0AV96 593 aaKnown RBP8.66□□□□□ -1.02
SSR2-202ENST00000368311 SEC24BO95487 1268 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 ITGB6P18564 788 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 MTFR1Q15390 333 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 FAM187BQ17R55 369 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 TAF1BQ53T94 588 aaPredicted RBP8.66□□□□□ -1.02
SSR2-202ENST00000368311 NLRP9Q7RTR0 991 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 COLGALT1Q8NBJ5 622 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 MAGEC3Q8TD91 643 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 RMDN1Q96DB5 314 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 EPSTI1Q96J88 318 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 RPRD1AQ96P16 312 aaPredicted RBP8.66□□□□□ -1.02
SSR2-202ENST00000368311 MTMR9Q96QG7 549 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 ABCB6Q9NP58 842 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 AGPAT5Q9NUQ2 364 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 TLK1Q9UKI8 766 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 HBS1LQ9Y450 684 aaKnown RBP8.66□□□□□ -1.02
SSR2-202ENST00000368311 E5RI56 91 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 SGK1O00141 431 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 BUB1O43683 1085 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms