RNA–Protein interactions for RNA: ENST00000361543.3

SGMS1-201, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best) BASIC

Gene SGMS1, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-201ENST00000361543 CYP27A1Q02318 531 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 FCHO2Q0JRZ9 810 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 PNOCQ13519 176 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 NCOA4Q13772 614 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 NFIL3Q16649 462 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 MDH1BQ5I0G3 518 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 FAM171BQ6P995 826 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 SCARA5Q6ZMJ2 495 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 ZNF852Q6ZMS4 543 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 TMEM150AQ86TG1 271 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 GPIHBP1Q8IV16 184 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 SCN4BQ8IWT1 228 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 FMR1NBQ8N0W7 255 aaPredicted RBP8.18□□□□□ -1.1
SGMS1-201ENST00000361543 GUF1Q8N442 669 aaKnown RBP8.18□□□□□ -1.1
SGMS1-201ENST00000361543 OR6B3Q8NGW1 331 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 MYCBPAPQ8TBZ2 947 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 CSGALNACT1Q8TDX6 532 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 TRMT2BQ96GJ1 504 aaKnown RBP8.18□□□□□ -1.1
SGMS1-201ENST00000361543 BCO2Q9BYV7 579 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 OSBPL6Q9BZF3 934 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 SMYD3Q9H7B4 428 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 VRTNQ9H8Y1 702 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 TRPV5Q9NQA5 729 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 MAGEC2Q9UBF1 373 aaPredicted RBP8.18□□□□□ -1.1
SGMS1-201ENST00000361543 UXTQ9UBK9 157 aaPredicted RBP8.18□□□□□ -1.1
SGMS1-201ENST00000361543 NXF1Q9UBU9 619 aaKnown RBP8.18□□□□□ -1.1
SGMS1-201ENST00000361543 ZMYM5Q9UJ78 669 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 TRAF3IP3Q9Y228 551 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 MRPS17Q9Y2R5 130 aaKnown RBP8.18□□□□□ -1.1
SGMS1-201ENST00000361543 MTF2Q9Y483 593 aaPredicted RBP8.18□□□□□ -1.1
SGMS1-201ENST00000361543 PIAS3Q9Y6X2 628 aa8.18□□□□□ -1.1
SGMS1-201ENST00000361543 FAM170BA6NMN3 283 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 A8MXQ7 604 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 MAN2B1O00754 1011 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 MAPK13O15264 365 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 CHADO15335 359 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 TADA3O75528 432 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 VNN1O95497 513 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 F11P03951 625 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 C4BPAP04003 597 aaKnown RBP8.17□□□□□ -1.1
SGMS1-201ENST00000361543 BDNFP23560 247 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 TARSP26639 723 aaKnown RBP8.17□□□□□ -1.1
SGMS1-201ENST00000361543 ANXA13P27216 316 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 GNL1P36915 607 aaPredicted RBP8.17□□□□□ -1.1
SGMS1-201ENST00000361543 PPP1R2P41236 205 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 NBL1P41271 181 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 PIK3CAP42336 1068 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 MAGEA9P43362 315 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 RAP1GAPP47736 663 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 ZACNQ401N2 412 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 ZCWPW2Q504Y3 356 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 ARHGAP29Q52LW3 1261 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 ZNF667Q5HYK9 610 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 TXNDC8Q6A555 127 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 VSTM1Q6UX27 236 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 FRMD5Q7Z6J6 570 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 C1orf210Q8IVY1 113 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 FAM186BQ8IYM0 893 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 SMYD4Q8IYR2 804 aaPredicted RBP8.17□□□□□ -1.1
SGMS1-201ENST00000361543 CMTM8Q8IZV2 173 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 CELF5Q8N6W0 485 aaKnown RBP8.17□□□□□ -1.1
SGMS1-201ENST00000361543 MAB21L3Q8N8X9 362 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 B3GALNT2Q8NCR0 500 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 TMC2Q8TDI7 906 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 BPIFB1Q8TDL5 484 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 MRPS31Q92665 395 aaKnown RBP8.17□□□□□ -1.1
SGMS1-201ENST00000361543 ELMO3Q96BJ8 720 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 PCED1BQ96HM7 432 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 ZFYVE19Q96K21 471 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 MYRFLQ96LU7 910 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 LRRC3BQ96PB8 259 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 SLC46A2Q9BY10 475 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 ELOVL4Q9GZR5 314 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 SMG9Q9H0W8 520 aaKnown RBP8.17□□□□□ -1.1
SGMS1-201ENST00000361543 DPEP3Q9H4B8 488 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 SLC24A3Q9HC58 644 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 TRPC7Q9HCX4 862 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 OBP2AQ9NY56 170 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 NDRG2Q9UN36 371 aaKnown RBP8.17□□□□□ -1.1
SGMS1-201ENST00000361543 NME7Q9Y5B8 376 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 FAM186AA6NE01 2351 aa8.17□□□□□ -1.1
SGMS1-201ENST00000361543 SHISA7A6NL88 538 aa8.16□□□□□ -1.1
SGMS1-201ENST00000361543 SOBPA7XYQ1 873 aa8.16□□□□□ -1.1
SGMS1-201ENST00000361543 PROB1E7EW31 1015 aa8.16□□□□□ -1.1
SGMS1-201ENST00000361543 F8VP50 259 aa8.16□□□□□ -1.1
SGMS1-201ENST00000361543 IKBKBO14920 756 aa8.16□□□□□ -1.1
SGMS1-201ENST00000361543 TRIM66O15016 1216 aa8.16□□□□□ -1.1
SGMS1-201ENST00000361543 NCAM2O15394 837 aa8.16□□□□□ -1.1
SGMS1-201ENST00000361543 ATP8B3O60423 1300 aa8.16□□□□□ -1.1
SGMS1-201ENST00000361543 GFRA3O60609 400 aa8.16□□□□□ -1.1
SGMS1-201ENST00000361543 AKAP3O75969 853 aa8.16□□□□□ -1.1
SGMS1-201ENST00000361543 MBD3O95983 291 aa8.16□□□□□ -1.1
SGMS1-201ENST00000361543 ASS1P00966 412 aaKnown RBP8.16□□□□□ -1.1
SGMS1-201ENST00000361543 HLA-DRAP01903 254 aa8.16□□□□□ -1.1
SGMS1-201ENST00000361543 CKMP06732 381 aa8.16□□□□□ -1.1
SGMS1-201ENST00000361543 FAM163BP0C2L3 166 aa8.16□□□□□ -1.1
SGMS1-201ENST00000361543 TRIM49P0CI25 452 aa8.16□□□□□ -1.1
SGMS1-201ENST00000361543 TRIM49CP0CI26 452 aa8.16□□□□□ -1.1
SGMS1-201ENST00000361543 KRT13P13646 458 aa8.16□□□□□ -1.1
SGMS1-201ENST00000361543 P4HA1P13674 534 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms