RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 BTNL10A8MVZ5 291 aa14.63□□□□□ -0.07
LSS-201ENST00000356396 ZC3H11AO75152 810 aaKnown RBP eCLIP14.63□□□□□ -0.072e-7■■■□□ 15.4
LSS-201ENST00000356396 INHAP05111 366 aa14.63□□□□□ -0.07
LSS-201ENST00000356396 PDGFRAP16234 1089 aa14.63□□□□□ -0.07
LSS-201ENST00000356396 GNL1P36915 607 aaPredicted RBP14.63□□□□□ -0.07
LSS-201ENST00000356396 MBTPS1Q14703 1052 aa14.63□□□□□ -0.07
LSS-201ENST00000356396 ENOSF1Q7L5Y1 443 aa14.63□□□□□ -0.07
LSS-201ENST00000356396 DEFB128Q7Z7B8 93 aa14.63□□□□□ -0.07
LSS-201ENST00000356396 FAM131BQ86XD5 332 aa14.63□□□□□ -0.07
LSS-201ENST00000356396 CEP57Q86XR8 500 aa14.63□□□□□ -0.07
LSS-201ENST00000356396 IFT20Q8IY31 132 aa14.63□□□□□ -0.07
LSS-201ENST00000356396 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.63□□□□□ -0.072e-6■■■■■ 55.4
LSS-201ENST00000356396 TM4SF4P48230 202 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 PGFP49763 221 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 MRPS6P82932 125 aaKnown RBP14.62□□□□□ -0.07
LSS-201ENST00000356396 NME3Q13232 169 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 TTMPQ5BVD1 217 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 MICALCLQ6ZW33 695 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 SOCS4Q8WXH5 440 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 PIK3R5Q8WYR1 880 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 C9orf72Q96LT7 481 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 MED10Q9BTT4 135 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 BCO2Q9BYV7 579 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 OSBPL8Q9BZF1 889 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 CARD9Q9H257 536 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 PARVAQ9NVD7 372 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 CTNNAL1Q9UBT7 734 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 TBK1Q9UHD2 729 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 ADAM21Q9UKJ8 722 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 CYB561D2O14569 222 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 PMM2O15305 246 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 PECAM1P16284 738 aaPredicted RBP14.62□□□□□ -0.07
LSS-201ENST00000356396 MIPP30301 263 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 BPIFB4P59827 614 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 PLEKHA7Q6IQ23 1121 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 SPNS2Q8IVW8 549 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 RASGEF1CQ8N431 466 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 TMEM174Q8WUU8 243 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 MTG1Q9BT17 334 aaPredicted RBP14.62□□□□□ -0.07
LSS-201ENST00000356396 DNAJB4Q9UDY4 337 aa14.62□□□□□ -0.07
LSS-201ENST00000356396 BARX2Q9UMQ3 279 aaPredicted RBP14.62□□□□□ -0.07
LSS-201ENST00000356396 M0QZ92 97 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 PAPSS1O43252 624 aaPredicted RBP14.61□□□□□ -0.07
LSS-201ENST00000356396 IL18RAPO95256 599 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 POU5F1Q01860 360 aaKnown RBP14.61□□□□□ -0.07
LSS-201ENST00000356396 MYO1EQ12965 1108 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 SPC25Q9HBM1 224 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 GDF3Q9NR23 364 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.61□□□□□ -0.07
LSS-201ENST00000356396 KCNG1Q9UIX4 513 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 ZNF148Q9UQR1 794 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 CEP83Q9Y592 693 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 HOXD8P13378 290 aaPredicted RBP14.61□□□□□ -0.07
LSS-201ENST00000356396 HSD17B3P37058 310 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 FASTKD3Q14CZ7 662 aaKnown RBP14.61□□□□□ -0.07
LSS-201ENST00000356396 ZNF410Q86VK4 478 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 DEFB118Q96PH6 123 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 ASB7Q9H672 318 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 UVRAGQ9P2Y5 699 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 UTP11Q9Y3A2 253 aaKnown RBP14.61□□□□□ -0.07
LSS-201ENST00000356396 COILP38432 576 aaPredicted RBP14.61□□□□□ -0.07
LSS-201ENST00000356396 ADIGQ0VDE8 80 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 FAM187BQ17R55 369 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 C11orf63Q6NUN7 778 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 ADGRF2Q8IZF7 708 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 BEST2Q8NFU1 509 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 RPS6KC1Q96S38 1066 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 ZNF518BQ9C0D4 1074 aa14.61□□□□□ -0.07
LSS-201ENST00000356396 TSPYL2Q9H2G4 693 aaPredicted RBP14.61□□□□□ -0.07
LSS-201ENST00000356396 CST8O60676 142 aa14.6□□□□□ -0.07
LSS-201ENST00000356396 ACLYP53396 1101 aa14.6□□□□□ -0.07
LSS-201ENST00000356396 TUBB2AQ13885 445 aa14.6□□□□□ -0.07
LSS-201ENST00000356396 HSP90B2PQ58FF3 399 aa14.6□□□□□ -0.07
LSS-201ENST00000356396 RTN4RL1Q86UN2 441 aaPredicted RBP14.6□□□□□ -0.07
LSS-201ENST00000356396 TUBB2BQ9BVA1 445 aa14.6□□□□□ -0.07
LSS-201ENST00000356396 KIAA0391O15091 583 aaKnown RBP14.6□□□□□ -0.07
LSS-201ENST00000356396 ADCY8P40145 1251 aa14.6□□□□□ -0.07
LSS-201ENST00000356396 PTGIRP43119 386 aa14.6□□□□□ -0.07
LSS-201ENST00000356396 CRYBB1P53674 252 aaPredicted RBP14.6□□□□□ -0.07
LSS-201ENST00000356396 LPIN1Q14693 890 aa14.6□□□□□ -0.07
LSS-201ENST00000356396 TCTN1Q2MV58 587 aa14.6□□□□□ -0.07
LSS-201ENST00000356396 TIGD5Q53EQ6 642 aa14.6□□□□□ -0.07
LSS-201ENST00000356396 SYPL2Q5VXT5 272 aa14.6□□□□□ -0.07
LSS-201ENST00000356396 PHF13Q86YI8 300 aaPredicted RBP14.6□□□□□ -0.07
LSS-201ENST00000356396 ZNF784Q8NCA9 323 aaPredicted RBP14.6□□□□□ -0.07
LSS-201ENST00000356396 UNC93B1Q9H1C4 597 aa14.6□□□□□ -0.07
LSS-201ENST00000356396 SNX25Q9H3E2 840 aa14.6□□□□□ -0.07
LSS-201ENST00000356396 DDX43Q9NXZ2 648 aaKnown RBP14.6□□□□□ -0.07
LSS-201ENST00000356396 CASP8AP2Q9UKL3 1982 aa14.59□□□□□ -0.07
LSS-201ENST00000356396 CREB1P16220 341 aa14.59□□□□□ -0.07
LSS-201ENST00000356396 CTNNA2P26232 953 aa14.59□□□□□ -0.07
LSS-201ENST00000356396 NOGQ13253 232 aa14.59□□□□□ -0.07
LSS-201ENST00000356396 OLIG2Q13516 323 aa14.59□□□□□ -0.07
LSS-201ENST00000356396 CFAP58Q5T655 872 aa14.59□□□□□ -0.07
LSS-201ENST00000356396 DSTYKQ6XUX3 929 aa14.59□□□□□ -0.07
LSS-201ENST00000356396 TTC9BQ8N6N2 239 aa14.59□□□□□ -0.07
LSS-201ENST00000356396 APPL2Q8NEU8 664 aa14.59□□□□□ -0.07
LSS-201ENST00000356396 SCAMP5Q8TAC9 235 aa14.59□□□□□ -0.07
LSS-201ENST00000356396 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.59□□□□□ -0.07
LSS-201ENST00000356396 MDM1Q8TC05 714 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms