RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 SLC11A1P49279 550 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 DEFB103AP81534 67 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 FPGSQ05932 587 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 IFI16Q16666 785 aaKnown RBP13.47□□□□□ -0.25
DDX39A-202ENST00000324340 PAN2Q504Q3 1202 aaKnown RBP13.47□□□□□ -0.25
DDX39A-202ENST00000324340 B4GALNT4Q76KP1 1039 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 METTL23Q86XA0 190 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 C12orf29Q8N999 325 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 C1orf131Q8NDD1 294 aaKnown RBP13.47□□□□□ -0.25
DDX39A-202ENST00000324340 SLC35G2Q8TBE7 412 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 HASPINQ8TF76 798 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 ZNF653Q96CK0 615 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 ALS2CR12Q96Q35 445 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 RTP3Q9BQQ7 232 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 ACBD6Q9BR61 282 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 COLEC11Q9BWP8 271 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 ABCB6Q9NP58 842 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 MARCH5Q9NX47 278 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 GGA2Q9UJY4 613 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 ADAM28Q9UKQ2 775 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 CDH9Q9ULB4 789 aa13.47□□□□□ -0.25
DDX39A-202ENST00000324340 I3L4J1 428 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 M0QYV0 167 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 SYN3O14994 580 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 BUB1O43683 1085 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 UPP2O95045 317 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 EFEMP2O95967 443 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 CALB1P05937 261 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 GALTP07902 379 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 PDGFRBP09619 1106 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 SETSIPP0DME0 302 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 PTPN1P18031 435 aaKnown RBP13.46□□□□□ -0.25
DDX39A-202ENST00000324340 PCSK1P29120 753 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 KIAA0319Q5VV43 1072 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 YTHDF3Q7Z739 585 aaKnown RBP13.46□□□□□ -0.25
DDX39A-202ENST00000324340 SLFN11Q7Z7L1 901 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 LRRC57Q8N9N7 239 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 TPCN2Q8NHX9 752 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 STK32AQ8WU08 396 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 BADQ92934 168 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 HNRNPABQ99729 332 aaKnown RBP13.46□□□□□ -0.25
DDX39A-202ENST00000324340 CWH43Q9H720 699 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 FAM204AQ9H8W3 233 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 CRTAC1Q9NQ79 661 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 ADAM22Q9P0K1 906 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 UVRAGQ9P2Y5 699 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 CNOT8Q9UFF9 292 aaKnown RBP13.46□□□□□ -0.25
DDX39A-202ENST00000324340 CYTH4Q9UIA0 394 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 COG5Q9UP83 839 aa13.46□□□□□ -0.25
DDX39A-202ENST00000324340 TIMM13Q9Y5L4 95 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-202ENST00000324340 TCRBV5S1A1TA0A578 114 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 GRID2IPA4D2P6 1211 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 TADA2AO75478 443 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 OAZ2O95190 189 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 FGBP02675 491 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 RRM1P23921 792 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 ACAT1P24752 427 aaKnown RBP13.45□□□□□ -0.26
DDX39A-202ENST00000324340 HNRNPH1P31943 449 aaKnown RBP13.45□□□□□ -0.26
DDX39A-202ENST00000324340 GABRB2P47870 512 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 RPL34P49207 117 aaKnown RBP13.45□□□□□ -0.26
DDX39A-202ENST00000324340 PDCLQ13371 301 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 GOLGA7BQ2TAP0 167 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 OVOS1Q6IE37 1185 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 PLEKHA7Q6IQ23 1121 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 FAM171BQ6P995 826 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 TTC30AQ86WT1 665 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 CMTR2Q8IYT2 770 aaKnown RBP13.45□□□□□ -0.26
DDX39A-202ENST00000324340 C7orf61Q8IZ16 206 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 ANKRD52Q8NB46 1076 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 SLC35F5Q8WV83 523 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 PKMYT1Q99640 499 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 SYT15Q9BQS2 421 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 C11orf70Q9BRQ4 267 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 HTATIP2Q9BUP3 242 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 OSGEPQ9NPF4 335 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 FAM49BQ9NUQ9 324 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 HCSTQ9UBK5 93 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 STRIP2Q9ULQ0 834 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 PRG3Q9Y2Y8 225 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-202ENST00000324340 CARNS1A5YM72 827 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 RNF40O75150 1001 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 ATP2C2O75185 946 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 PALMO75781 387 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 FSBPO95073 299 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 CCDC130P13994 396 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 TKTP29401 623 aaKnown RBP13.45□□□□□ -0.26
DDX39A-202ENST00000324340 BCAT1P54687 386 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 NAP1L1P55209 391 aaKnown RBP13.45□□□□□ -0.26
DDX39A-202ENST00000324340 BCAR1P56945 870 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 PSMC1P62191 440 aaKnown RBP13.45□□□□□ -0.26
DDX39A-202ENST00000324340 PLCB3Q01970 1234 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 YWHAHQ04917 246 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-202ENST00000324340 ELAVL2Q12926 359 aaKnown RBP13.45□□□□□ -0.26
DDX39A-202ENST00000324340 MRPL58Q14197 206 aaKnown RBP13.45□□□□□ -0.26
DDX39A-202ENST00000324340 PTPN20Q4JDL3 420 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 INTS6LQ5JSJ4 861 aaKnown RBP13.45□□□□□ -0.26
DDX39A-202ENST00000324340 LIN9Q5TKA1 542 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 PSRC1Q6PGN9 363 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-202ENST00000324340 PAQR9Q6ZVX9 377 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 MICALCLQ6ZW33 695 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms