RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 MAF1Q9H063 256 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 TSPYL2Q9H2G4 693 aaPredicted RBP9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 PDZD7Q9H5P4 517 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 SMYD2Q9NRG4 433 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 USP18Q9UMW8 372 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 L1RE1Q9UN81 338 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 ATP11BQ9Y2G3 1177 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 TYW5A2RUC4 315 aaKnown RBP9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 RASA4BC9J798 803 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 RASA4O43374 803 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 PPP1R37O75864 691 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 SESN2P58004 480 aaPredicted RBP9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 TERF2Q15554 542 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 HIF1AQ16665 826 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 GKAP1Q5VSY0 366 aaPredicted RBP9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 C4orf50Q6ZRC1 276 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 C1orf127Q8N9H9 656 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 SENP8Q96LD8 212 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 EPAS1Q99814 870 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 TUBGCP4Q9UGJ1 667 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 DCDC2CA8MYV0 355 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 TSPAN1O60635 241 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 MSCO60682 206 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 APOEP02649 317 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 ASGR1P07306 291 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 PAEPP09466 180 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 RARAP10276 462 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 RFC1P35251 1148 aaPredicted RBP9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 GJA5P36382 358 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 NOMO3P69849 1222 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 ADIGQ0VDE8 80 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 BST2Q10589 180 aaKnown RBP9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 SKIV2LQ15477 1246 aaKnown RBP9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 MFSD7Q6UXD7 560 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 BBS5Q8N3I7 341 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 EDEM1Q92611 657 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 ZNF512Q96ME7 567 aaPredicted RBP9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 TMEM121Q9BTD3 319 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 APOBEC3GQ9HC16 384 aaKnown RBP9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 HAUS2Q9NVX0 235 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 NEU2Q9Y3R4 380 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 MRPL42Q9Y6G3 142 aaKnown RBP9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 MYO9BQ13459 2157 aa9.73□□□□□ -0.85
TMEM39A-201ENST00000319172 LOC102724159A0A0B4J2E5 919 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 CCDC78A2IDD5 438 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 SKIP12755 728 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 ITIH2P19823 946 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 TKTL1P51854 596 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 CRYBB1P53674 252 aaPredicted RBP9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 AMPD2Q01433 879 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 OTUD4Q01804 1114 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 MAMLD1Q13495 774 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 PWP2Q15269 919 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 TFDP3Q5H9I0 405 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 PCGF5Q86SE9 256 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 ADAM32Q8TC27 787 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 ACTL9Q8TC94 416 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 LRRC8CQ8TDW0 803 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 FBF1Q8TES7 1133 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 PGLYRP2Q96PD5 576 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 R3HDMLQ9H3Y0 253 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 AVENQ9NQS1 362 aaPredicted RBP9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 ADAMTS5Q9UNA0 930 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 BCORQ6W2J9 1755 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 COL5A3P25940 1745 aaPredicted RBP9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 UBR3Q6ZT12 1888 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 SMIM35A0A1B0GVV1 85 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 EEF2KO00418 725 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 SNAI1O95863 264 aaPredicted RBP9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 GRM5P41594 1212 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 JAM2P57087 298 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 BFSP2Q13515 415 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 LRRC14Q15048 493 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 LONRF1Q17RB8 773 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 OVOS1Q6IE37 1185 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 SPOCD1Q6ZMY3 1216 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 RAPH1Q70E73 1250 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 NT5DC4Q86YG4 428 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 DCP1BQ8IZD4 617 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 HNRNPLLQ8WVV9 542 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 ZNF516Q92618 1163 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 ALG3Q92685 438 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 ARHGEF2Q92974 986 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 VCPIP1Q96JH7 1222 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 ATP6V1G3Q96LB4 118 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 C2CD2Q9Y426 696 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 PCDHA3Q9Y5H8 950 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 ZC3H4Q9UPT8 1303 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 A0A1B0GUL6 1792 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 CA12O43570 354 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 B4GALT4O60513 344 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 AOC2O75106 756 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 DUSP11O75319 330 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 ZFXP17010 805 aaPredicted RBP9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 EPHB2P29323 1055 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 ALDH7A1P49419 539 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 SLC29A2Q14542 456 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 ZNF792Q3KQV3 632 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 OLFML2BQ68BL8 750 aa9.72□□□□□ -0.85
TMEM39A-201ENST00000319172 MIB1Q86YT6 1006 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms