RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 ZBTB46Q86UZ6 589 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 SATL1Q86VE3 508 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 ARFGAP1Q8N6T3 406 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 B4GALNT2Q8NHY0 566 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 GRK7Q8WTQ7 553 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 DCAKDQ8WVC6 231 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 NAP1L4Q99733 375 aaKnown RBP10.08□□□□□ -0.8
RPGR-201ENST00000318842 TARS2Q9BW92 718 aaKnown RBP10.08□□□□□ -0.8
RPGR-201ENST00000318842 TMEM8AQ9HCN3 771 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 RHBDL2Q9NX52 303 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 XPO7Q9UIA9 1087 aaKnown RBP10.08□□□□□ -0.8
RPGR-201ENST00000318842 ASB3Q9Y575 518 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 SLC4A7Q9Y6M7 1214 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 MTA2O94776 668 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 MT-ND3P03897 115 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 DLDP09622 509 aaKnown RBP10.08□□□□□ -0.8
RPGR-201ENST00000318842 GEMIN4P57678 1058 aaKnown RBP10.08□□□□□ -0.8
RPGR-201ENST00000318842 SLC34A1Q06495 639 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 FSTL1Q12841 308 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 OLIG2Q13516 323 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 C1orf146Q5VVC0 180 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 PRAMEF18Q5VWM3 479 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 SWSAP1Q6NVH7 229 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 TRMT10BQ6PF06 316 aaKnown RBP10.08□□□□□ -0.8
RPGR-201ENST00000318842 MOXD1Q6UVY6 613 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 ALLCQ8N6M5 410 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 ENDOVQ8N8Q3 282 aaKnown RBP10.08□□□□□ -0.8
RPGR-201ENST00000318842 NSL1Q96IY1 281 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 PIWIL1Q96J94 861 aaKnown RBP10.08□□□□□ -0.8
RPGR-201ENST00000318842 OXCT2Q9BYC2 517 aaPredicted RBP10.08□□□□□ -0.8
RPGR-201ENST00000318842 TRIM55Q9BYV6 548 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 NXF1Q9UBU9 619 aaKnown RBP10.08□□□□□ -0.8
RPGR-201ENST00000318842 SEPT9Q9UHD8 586 aaPredicted RBP10.08□□□□□ -0.8
RPGR-201ENST00000318842 SLC7A8Q9UHI5 535 aa10.08□□□□□ -0.8
RPGR-201ENST00000318842 TRIM49D1C9J1S8 452 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 LYNP07948 512 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 TROVE2P10155 538 aaKnown RBP eCLIP10.07□□□□□ -0.8
RPGR-201ENST00000318842 PHKA2P46019 1235 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 TMPRSS15P98073 1019 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 BST1Q10588 318 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 CHI3L2Q15782 390 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 SFT2D3Q587I9 215 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 IL31Q6EBC2 164 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 MTHFD1LQ6UB35 978 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 PTAR1Q7Z6K3 402 aaPredicted RBP10.07□□□□□ -0.8
RPGR-201ENST00000318842 MPP5Q8N3R9 675 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 PGBD4Q96DM1 585 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 OXNAD1Q96HP4 312 aaPredicted RBP10.07□□□□□ -0.8
RPGR-201ENST00000318842 GBP5Q96PP8 586 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 SENP7Q9BQF6 1050 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 UNKQ9C0B0 810 aaKnown RBP10.07□□□□□ -0.8
RPGR-201ENST00000318842 DDX18Q9NVP1 670 aaKnown RBP10.07□□□□□ -0.8
RPGR-201ENST00000318842 STOML1Q9UBI4 398 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 RIPK3Q9Y572 518 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 COL14A1Q05707 1796 aaKnown RBP10.07□□□□□ -0.8
RPGR-201ENST00000318842 TCRBV9S1A1TA0A576 114 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 CCDC78A2IDD5 438 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 LRRIQ4A6NIV6 560 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 SPDYE16A6NNV3 312 aaPredicted RBP10.07□□□□□ -0.8
RPGR-201ENST00000318842 C2CD2LO14523 706 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 ITM2AO43736 263 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 ECE2O60344 883 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 P4HBP07237 508 aaKnown RBP10.07□□□□□ -0.8
RPGR-201ENST00000318842 ATP6V1B1P15313 513 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 CD19P15391 556 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 ACADSP16219 412 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 MUTP22033 750 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 KCNA4P22459 653 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 PEX2P28328 305 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 CCNG1P51959 295 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 AQP4P55087 323 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 MRPS35P82673 323 aaKnown RBP10.07□□□□□ -0.8
RPGR-201ENST00000318842 DEUP1Q05D60 604 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 DLG1Q12959 904 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 CNPY1Q3B7I2 92 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 CES3Q6UWW8 571 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 CENPUQ71F23 418 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 SLC9A9Q8IVB4 645 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 SLC26A7Q8TE54 656 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 CCDC17Q96LX7 622 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 PLVAPQ9BX97 442 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 COA1Q9GZY4 146 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 SMYD2Q9NRG4 433 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 CYTH4Q9UIA0 394 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 HEY1Q9Y5J3 304 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 NRAPQ86VF7 1730 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 MYO18AQ92614 2054 aaKnown RBP10.07□□□□□ -0.8
RPGR-201ENST00000318842 CCDC160A6NGH7 325 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 MAP3K7O43318 606 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 CCDC22O60826 627 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 ARSAP15289 507 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 ADORA2AP29274 412 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 GTF2BQ00403 316 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 MKRN3Q13064 507 aaKnown RBP10.07□□□□□ -0.8
RPGR-201ENST00000318842 DMP1Q13316 513 aaPredicted RBP10.07□□□□□ -0.8
RPGR-201ENST00000318842 ACAP1Q15027 740 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 TMPRSS6Q8IU80 811 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 RIBC1Q8N443 379 aaPredicted RBP10.07□□□□□ -0.8
RPGR-201ENST00000318842 BANPQ8N9N5 519 aa10.07□□□□□ -0.8
RPGR-201ENST00000318842 TMEM206Q9H813 350 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms