RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 RPL34P49207 117 aaKnown RBP12.65□□□□□ -0.38
TPM3-202ENST00000302206 DRG2P55039 364 aaKnown RBP12.65□□□□□ -0.38
TPM3-202ENST00000302206 TAS2R40P59535 323 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 PPP1R26Q5T8A7 1209 aaPredicted RBP12.65□□□□□ -0.38
TPM3-202ENST00000302206 CYP4A22Q5TCH4 519 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 AADACL2Q6P093 401 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 AGMOQ6ZNB7 445 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 TMEM110Q86TL2 294 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 ACOT1Q86TX2 421 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 ZDHHC17Q8IUH5 632 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 C7orf61Q8IZ16 206 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 ADGRF2Q8IZF7 708 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 TDHQ8IZJ6 230 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 TMEM86AQ8N2M4 240 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 GSTCDQ8NEC7 633 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 CASKIN2Q8WXE0 1202 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 SLCO2A1Q92959 643 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 SLC4A5Q9BY07 1137 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 UBXN6Q9BZV1 441 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 TSPYL2Q9H2G4 693 aaPredicted RBP12.65□□□□□ -0.38
TPM3-202ENST00000302206 LRRC19Q9H756 370 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 FAM114A2Q9NRY5 505 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 TRMT13Q9NUP7 481 aaKnown RBP12.65□□□□□ -0.38
TPM3-202ENST00000302206 RASAL2Q9UJF2 1139 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 ZMYND8Q9ULU4 1186 aaPredicted RBP12.65□□□□□ -0.38
TPM3-202ENST00000302206 NR2E1Q9Y466 385 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 NME7Q9Y5B8 376 aa12.65□□□□□ -0.38
TPM3-202ENST00000302206 A0A1W2PQ45 241 aaPredicted RBP12.64□□□□□ -0.39
TPM3-202ENST00000302206 A0A1W2PQY0 241 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 ARL5CA6NH57 179 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 GOLGA8SH3BPF8 625 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 PODXLO00592 558 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 GABRDO14764 452 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 GJB6O95452 261 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 RARAP10276 462 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 GHRP10912 638 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 FGFR1P11362 822 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 RFC1P35251 1148 aaPredicted RBP12.64□□□□□ -0.39
TPM3-202ENST00000302206 MLH1P40692 756 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 PTGIRP43119 386 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 PLA2G4AP47712 749 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 AARSP49588 968 aaKnown RBP eCLIP12.64□□□□□ -0.39
TPM3-202ENST00000302206 BCAT1P54687 386 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 DR1Q01658 176 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 OGDHQ02218 1023 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 GPS2Q13227 327 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 ZNF618Q5T7W0 954 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 SYDE1Q6ZW31 735 aaPredicted RBP12.64□□□□□ -0.39
TPM3-202ENST00000302206 ARCQ7LC44 396 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 MREGQ8N565 214 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 C12orf29Q8N999 325 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 ANKRD52Q8NB46 1076 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 UBA3Q8TBC4 463 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 DIS3LQ8TF46 1054 aaKnown RBP12.64□□□□□ -0.39
TPM3-202ENST00000302206 SLC35F5Q8WV83 523 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 MAGOHBQ96A72 148 aaKnown RBP12.64□□□□□ -0.39
TPM3-202ENST00000302206 ZFP42Q96MM3 310 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 UROC1Q96N76 676 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 GAD1Q99259 594 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 NCAPGQ9BPX3 1015 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 FAM129AQ9BZQ8 928 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 AMACRQ9UHK6 382 aa12.64□□□□□ -0.39
TPM3-202ENST00000302206 UTP11Q9Y3A2 253 aaKnown RBP12.64□□□□□ -0.39
TPM3-202ENST00000302206 LAMA2P24043 3122 aaKnown RBP12.64□□□□□ -0.39
TPM3-202ENST00000302206 ARVCFO00192 962 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 DPYSL4O14531 572 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 CYB561D2O14569 222 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 TTI1O43156 1089 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 MGEA5O60502 916 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 KRT7P08729 469 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 CKBP12277 381 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 PSMA2P25787 234 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 COILP38432 576 aaPredicted RBP12.63□□□□□ -0.39
TPM3-202ENST00000302206 ACADSBP45954 432 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 LHX1P48742 406 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 CARSP49589 748 aaKnown RBP12.63□□□□□ -0.39
TPM3-202ENST00000302206 ZNF143P52747 638 aaPredicted RBP12.63□□□□□ -0.39
TPM3-202ENST00000302206 BST2Q10589 180 aaKnown RBP12.63□□□□□ -0.39
TPM3-202ENST00000302206 GRIK3Q13003 919 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 KLF1Q13351 362 aaPredicted RBP12.63□□□□□ -0.39
TPM3-202ENST00000302206 HADHQ16836 314 aaKnown RBP12.63□□□□□ -0.39
TPM3-202ENST00000302206 DUPD1Q68J44 220 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 TRAF7Q6Q0C0 670 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 TTC30AQ86WT1 665 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 ZDHHC14Q8IZN3 488 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 JOSD2Q8TAC2 188 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 HSFY1Q96LI6 401 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 HNRNPABQ99729 332 aaKnown RBP12.63□□□□□ -0.39
TPM3-202ENST00000302206 ADAM2Q99965 735 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 ERP44Q9BS26 406 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 OSBPL8Q9BZF1 889 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 RSAD1Q9HA92 442 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 GOLGA2P5Q9HBQ8 144 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 PAK6Q9NQU5 681 aaPredicted RBP12.63□□□□□ -0.39
TPM3-202ENST00000302206 STARD7Q9NQZ5 370 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 METTL5Q9NRN9 209 aaKnown RBP12.63□□□□□ -0.39
TPM3-202ENST00000302206 ASNSD1Q9NWL6 643 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 FEZ2Q9UHY8 353 aaPredicted RBP12.63□□□□□ -0.39
TPM3-202ENST00000302206 USTQ9Y2C2 406 aa12.63□□□□□ -0.39
TPM3-202ENST00000302206 EFR3BQ9Y2G0 817 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms