RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 USP17L7P0C7H9 530 aa10.65□□□□□ -0.7
GABRB3-201ENST00000299267 NR1D1P20393 614 aa10.65□□□□□ -0.7
GABRB3-201ENST00000299267 CCT5P48643 541 aa10.65□□□□□ -0.7
GABRB3-201ENST00000299267 CRYBB1P53674 252 aaPredicted RBP10.65□□□□□ -0.7
GABRB3-201ENST00000299267 C15orf59Q2T9L4 293 aaPredicted RBP10.65□□□□□ -0.7
GABRB3-201ENST00000299267 NETO2Q8NC67 525 aa10.65□□□□□ -0.7
GABRB3-201ENST00000299267 LNX1Q8TBB1 728 aaPredicted RBP10.65□□□□□ -0.7
GABRB3-201ENST00000299267 LRRN4Q8WUT4 740 aa10.65□□□□□ -0.7
GABRB3-201ENST00000299267 SNF8Q96H20 258 aa10.65□□□□□ -0.7
GABRB3-201ENST00000299267 TMEM121Q9BTD3 319 aa10.65□□□□□ -0.7
GABRB3-201ENST00000299267 SLC13A1Q9BZW2 595 aa10.65□□□□□ -0.7
GABRB3-201ENST00000299267 ENTPD7Q9NQZ7 604 aa10.65□□□□□ -0.7
GABRB3-201ENST00000299267 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.65□□□□□ -0.7
GABRB3-201ENST00000299267 BFARQ9NZS9 450 aa10.65□□□□□ -0.7
GABRB3-201ENST00000299267 SLX4Q8IY92 1834 aa10.65□□□□□ -0.7
GABRB3-201ENST00000299267 ADGRA3Q8IWK6 1321 aa10.65□□□□□ -0.71
GABRB3-201ENST00000299267 PHF2O75151 1096 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 ARL2P36404 184 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 MAPK7Q13164 816 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 BMT2Q1RMZ1 405 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 ILDR2Q71H61 639 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 PNKPQ96T60 521 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 APOL2Q9BQE5 337 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 TLR10Q9BXR5 811 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 NIFKQ9BYG3 293 aaKnown RBP10.64□□□□□ -0.71
GABRB3-201ENST00000299267 CARD9Q9H257 536 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 HSD3B7Q9H2F3 369 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 ALG13Q9NP73 1137 aaKnown RBP10.64□□□□□ -0.71
GABRB3-201ENST00000299267 USP18Q9UMW8 372 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 IPPQ9Y573 584 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 URB1O60287 2271 aaKnown RBP10.64□□□□□ -0.71
GABRB3-201ENST00000299267 MSCO60682 206 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 LHX1P48742 406 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 FAM47EQ6ZV65 393 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 RNF135Q8IUD6 432 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 TTC17Q96AE7 1141 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 VPS11Q9H270 941 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 R3HDMLQ9H3Y0 253 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 IPO11Q9UI26 975 aaKnown RBP10.64□□□□□ -0.71
GABRB3-201ENST00000299267 MOSPD1Q9UJG1 213 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 PPME1Q9Y570 386 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 SPEF2Q9C093 1822 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 ANKRD65E5RJM6 399 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 RGS20O76081 388 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 URODP06132 367 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 PYGMP11217 842 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 RPL7AP62424 266 aaKnown RBP10.64□□□□□ -0.71
GABRB3-201ENST00000299267 MEA1Q16626 185 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 HIF1AQ16665 826 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 BOLA3Q53S33 107 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 OTOP2Q7RTS6 562 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 CELF6Q96J87 481 aaKnown RBP10.64□□□□□ -0.71
GABRB3-201ENST00000299267 PFDN4Q9NQP4 134 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 INTUQ9ULD6 942 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 CHMP2BQ9UQN3 213 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 SLC27A5Q9Y2P5 690 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 SLC12A8A0AV02 714 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 PROSCO94903 275 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 RFC1P35251 1148 aaPredicted RBP10.64□□□□□ -0.71
GABRB3-201ENST00000299267 BST2Q10589 180 aaKnown RBP10.64□□□□□ -0.71
GABRB3-201ENST00000299267 MAPRE1Q15691 268 aaKnown RBP10.64□□□□□ -0.71
GABRB3-201ENST00000299267 ZNF280DQ6N043 979 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 SLC25A41Q8N5S1 370 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 HDAC7Q8WUI4 952 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 ALKBH8Q96BT7 664 aaKnown RBP10.64□□□□□ -0.71
GABRB3-201ENST00000299267 KLF6Q99612 283 aaPredicted RBP10.64□□□□□ -0.71
GABRB3-201ENST00000299267 PIH1D1Q9NWS0 290 aaKnown RBP10.64□□□□□ -0.71
GABRB3-201ENST00000299267 UBP1Q9NZI7 540 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 KIAA1257Q9ULG3 409 aa10.64□□□□□ -0.71
GABRB3-201ENST00000299267 SMIM28A0A1B0GU29 152 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 FAM187AA6NFU0 413 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 SPAG7O75391 227 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 PMPCBO75439 489 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 GJA5P36382 358 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 GARSP41250 739 aaKnown RBP10.63□□□□□ -0.71
GABRB3-201ENST00000299267 ZSCAN26Q16670 478 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 C6orf163Q5TEZ5 329 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 CCNI2Q6ZMN8 369 aaPredicted RBP10.63□□□□□ -0.71
GABRB3-201ENST00000299267 IRF2BP2Q7Z5L9 587 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 TFAP2DQ7Z6R9 452 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 RASAL3Q86YV0 1011 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 CDKL3Q8IVW4 592 aaPredicted RBP10.63□□□□□ -0.71
GABRB3-201ENST00000299267 DEFB106AQ8N104 65 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 EFHBQ8N7U6 833 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 SHC3Q92529 594 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 RAPGEF5Q92565 580 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 ERLEC1Q96DZ1 483 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 SCLYQ96I15 445 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 MUC3BQ9H195 1237 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 HIPK3Q9H422 1215 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 MAP1BP46821 2468 aaKnown RBP10.63□□□□□ -0.71
GABRB3-201ENST00000299267 PPP1R12AO14974 1030 aaPredicted RBP10.63□□□□□ -0.71
GABRB3-201ENST00000299267 SNAI1O95863 264 aaPredicted RBP10.63□□□□□ -0.71
GABRB3-201ENST00000299267 LRG1P02750 347 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 AXLP30530 894 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 SERPINB6P35237 376 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 ARHGAP25P42331 645 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 RTP1P59025 263 aa10.63□□□□□ -0.71
GABRB3-201ENST00000299267 OTUD4Q01804 1114 aaKnown RBP10.63□□□□□ -0.71
GABRB3-201ENST00000299267 MAP7D1Q3KQU3 841 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms