RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ATP6V0A4Q9HBG4 840 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 NPHS2Q9NP85 383 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 AGPAT5Q9NUQ2 364 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 PARVAQ9NVD7 372 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 INPP5FQ9Y2H2 1132 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 H3BRB1 525 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 SNX2O60749 519 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 CST5P28325 142 aaPredicted RBP12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 ACTR2P61160 394 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 ITGA7Q13683 1181 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 ITPRIPL1Q6GPH6 555 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 LRRC8EQ6NSJ5 796 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 LRRC31Q6UY01 552 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 C7orf61Q8IZ16 206 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 MYCBPAPQ8TBZ2 947 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 TUT1Q9H6E5 874 aaKnown RBP12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 BLOC1S6Q9UL45 172 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 GREB1LQ9C091 1923 aaPredicted RBP12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 RBM47A0AV96 593 aaKnown RBP12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 SMAPO00193 183 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 SLC4A1P02730 911 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 MMP3P08254 477 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 DAB2P98082 770 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 STX3Q13277 289 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 MTHFD1LQ6UB35 978 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 IL31RAQ8NI17 732 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 CHCHD3Q9NX63 227 aaKnown RBP12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 PCSK1NQ9UHG2 260 aa12.37□□□□□ -0.43
SYNGAP1-201ENST00000293748 EMSYQ7Z589 1322 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 SPAG6O75602 509 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 SCP2P22307 547 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 KPNB1Q14974 876 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 LONRF1Q17RB8 773 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 SLC35G1Q2M3R5 365 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 OR2W6PQ8NHA6 318 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 CDC26Q8NHZ8 85 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 POTEFA5A3E0 1075 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 MAGEB2O15479 319 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 TDP2O95551 362 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 TRIM49P0CI25 452 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 TRIM49CP0CI26 452 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 SERPINB9P50453 376 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 RTP1P59025 263 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 CDC42EP1Q00587 391 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 TRADDQ15628 312 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 SWSAP1Q6NVH7 229 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 TAPT1Q6NXT6 567 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 POTEGQ6S5H5 508 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 POTEEQ6S8J3 1075 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 SPDYE1Q8NFV5 336 aaPredicted RBP12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 COPS5Q92905 334 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 ZFATQ9P243 1243 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 TRIM10Q9UDY6 481 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 PHF24Q9UPV7 400 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 P4HBP07237 508 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 FDPSP14324 419 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 TMED10P49755 219 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 ALDH18A1P54886 795 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 PSMC5P62195 406 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 POU5F1BQ06416 359 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 CAPRIN1Q14444 709 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 EPHA7Q15375 998 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 SPOUT1Q5T280 376 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 TMEM199Q8N511 208 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 OR6B3Q8NGW1 331 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 EME1Q96AY2 570 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 FAM213AQ9BRX8 229 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 FSD1LQ9BXM9 530 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 GABBR1Q9UBS5 961 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 DBR1Q9UK59 544 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 STAP1Q9ULZ2 295 aa12.36□□□□□ -0.43
SYNGAP1-201ENST00000293748 UCHL3P15374 230 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 BRD2P25440 801 aaKnown RBP12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 MAPK6Q16659 721 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 EDRF1Q3B7T1 1238 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 THNSL1Q8IYQ7 743 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 RCOR2Q8IZ40 523 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 ENGASEQ8NFI3 743 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 SLC35G2Q8TBE7 412 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 C9orf72Q96LT7 481 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 DENND3A2RUS2 1198 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 MAGEA13PA6NCF6 341 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 B2RBV5 119 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 LGALS2P05162 132 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 KRT8P05787 483 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 COL9A3Q14050 684 aaPredicted RBP12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 KYNUQ16719 465 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 KIF2BQ8N4N8 673 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 TEKT4Q8WW24 435 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 SYN2Q92777 582 aaPredicted RBP12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 ARL8AQ96BM9 186 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 THTPAQ9BU02 230 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 FNDC3AQ9Y2H6 1198 aaKnown RBP12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 GTPBP10A4D1E9 387 aaKnown RBP12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 ARVCFO00192 962 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 SLC16A4O15374 487 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 SLC26A4O43511 780 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 PARNO95453 639 aaKnown RBP12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 ANP32DO95626 131 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms