RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 TBCBQ99426 244 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 TCF7L2Q9NQB0 619 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 PIK3C2AO00443 1686 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 FAM25AB3EWG3 89 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 FAM25CB3EWG5 89 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 FAM25GB3EWG6 89 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 SERPINI2O75830 405 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 SP100P23497 879 aaPredicted RBP12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 TKTP29401 623 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 ZNF554Q86TJ5 538 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 UTP6Q9NYH9 597 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 THRAP3Q9Y2W1 955 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 TOPAZ1Q8N9V7 1692 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 KATNA1O75449 491 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 PMLP29590 882 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 KCNJ1P48048 391 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 NUDT2P50583 147 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 CTTNQ14247 550 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 FER1L4A9Z1Z3 1794 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 OCM2P0CE71 109 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 OCMP0CE72 109 aaPredicted RBP12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 BMT2Q1RMZ1 405 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 CIAPIN1Q6FI81 312 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 RTKN2Q8IZC4 609 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 CNBD2Q96M20 576 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 DHX33Q9H6R0 707 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 DDX28Q9NUL7 540 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 UBR1Q8IWV7 1749 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 PARP4Q9UKK3 1724 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 DENND3A2RUS2 1198 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 CFAP99D6REC4 459 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 GOLGA8RI6L899 631 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 PMS1P54277 932 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 TDRPQ86YL5 185 aa12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 ARHGEF1Q92888 912 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 CCNL1Q9UK58 526 aaPredicted RBP12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 HBS1LQ9Y450 684 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-201ENST00000264709 PSMD3O43242 534 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 AKAP3O75969 853 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 C4BPBP20851 252 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 TSPAN14Q8NG11 270 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 CYGBQ8WWM9 190 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 SRPK1Q96SB4 655 aaKnown RBP12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 TMEM117Q9H0C3 514 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 MINPP1Q9UNW1 487 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 TTLL3Q9Y4R7 772 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 LINC00523Q86TU6 105 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 ULK2Q8IYT8 1036 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 GIMAP4Q9NUV9 329 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 KLHL8Q9P2G9 620 aaPredicted RBP12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 ZBBXA8MT70 800 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 CHRM1P11229 460 aaPredicted RBP12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 SP4Q02446 784 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 MTMR1Q13613 665 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 SPIDRQ14159 915 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 CAMK1DQ8IU85 385 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 ZNF513Q8N8E2 541 aaPredicted RBP12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 PTPRN2Q92932 1015 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 BORCS5Q969J3 196 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 GTSE1Q9NYZ3 720 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 DKK3Q9UBP4 350 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 DRG1Q9Y295 367 aaKnown RBP12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 WDR37Q9Y2I8 494 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 LRRC42Q9Y546 428 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 FOXN3O00409 490 aaPredicted RBP12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 OATP04181 439 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 C21orf59P57076 290 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 PIWIL2Q8TC59 973 aaKnown RBP12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 S100ZQ8WXG8 99 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 SLCO2A1Q92959 643 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 C9orf16Q9BUW7 83 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 CNGB3Q9NQW8 809 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 C20orf96Q9NUD7 363 aaPredicted RBP12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 KLRC4O43908 158 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 SNAP91O60641 907 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 SRP72O76094 671 aaKnown RBP12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 SAT1P21673 171 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 JAK1P23458 1154 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 LRRC57Q8N9N7 239 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 FEZF2Q8TBJ5 459 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 ADNPQ9H2P0 1102 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 RAB6BQ9NRW1 208 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 EDF1O60869 148 aaKnown RBP12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 CBX6O95503 412 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 UQCRBP14927 111 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 MLH1P40692 756 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 ARHGEF6Q15052 776 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 TRIM69Q86WT6 500 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 DEFB107AQ8IZN7 70 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 BDH2Q9BUT1 245 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 LNPEPQ9UIQ6 1025 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 PDK1Q15118 436 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 SENP2Q9HC62 589 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 PLK2Q9NYY3 685 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 AURKCQ9UQB9 309 aa12.13□□□□□ -0.47
DNMT3A-201ENST00000264709 RUNX1T1Q06455 604 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 PPP6R3Q5H9R7 873 aaPredicted RBP12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 TRABD2AQ86V40 505 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms