RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 HMGXB4Q9UGU5 601 aa24.46■■□□□ 1.51
LSM4-201ENST00000252816 F8VP50 259 aa24.45■■□□□ 1.5
LSM4-201ENST00000252816 WEE1P30291 646 aa24.45■■□□□ 1.5
LSM4-201ENST00000252816 TCF15Q12870 199 aa24.45■■□□□ 1.5
LSM4-201ENST00000252816 KRT39Q6A163 491 aa24.45■■□□□ 1.5
LSM4-201ENST00000252816 KLHL10Q6JEL2 608 aa24.45■■□□□ 1.5
LSM4-201ENST00000252816 E2F7Q96AV8 911 aa24.45■■□□□ 1.5
LSM4-201ENST00000252816 BCO2Q9BYV7 579 aa24.45■■□□□ 1.5
LSM4-201ENST00000252816 FOXQ1Q9C009 403 aa24.45■■□□□ 1.5
LSM4-201ENST00000252816 SMG9Q9H0W8 520 aaKnown RBP24.45■■□□□ 1.5
LSM4-201ENST00000252816 UXTQ9UBK9 157 aaPredicted RBP24.45■■□□□ 1.5
LSM4-201ENST00000252816 RFX1P22670 979 aa24.44■■□□□ 1.5
LSM4-201ENST00000252816 PLA2G5P39877 138 aa24.44■■□□□ 1.5
LSM4-201ENST00000252816 NDST1P52848 882 aa24.44■■□□□ 1.5
LSM4-201ENST00000252816 USP46P62068 366 aa24.44■■□□□ 1.5
LSM4-201ENST00000252816 ORC1Q13415 861 aa24.44■■□□□ 1.5
LSM4-201ENST00000252816 TXNDC8Q6A555 127 aa24.44■■□□□ 1.5
LSM4-201ENST00000252816 ACOT1Q86TX2 421 aa24.44■■□□□ 1.5
LSM4-201ENST00000252816 MAB21L3Q8N8X9 362 aa24.44■■□□□ 1.5
LSM4-201ENST00000252816 DUSP9Q99956 384 aaKnown RBP24.44■■□□□ 1.5
LSM4-201ENST00000252816 DDX23Q9BUQ8 820 aaKnown RBP24.44■■□□□ 1.5
LSM4-201ENST00000252816 IMPG2Q9BZV3 1241 aa24.44■■□□□ 1.5
LSM4-201ENST00000252816 ELOVL4Q9GZR5 314 aa24.44■■□□□ 1.5
LSM4-201ENST00000252816 HEBP1Q9NRV9 189 aa24.44■■□□□ 1.5
LSM4-201ENST00000252816 TRIM66O15016 1216 aa24.43■■□□□ 1.5
LSM4-201ENST00000252816 MXI1P50539 228 aa24.43■■□□□ 1.5
LSM4-201ENST00000252816 PRKCQQ04759 706 aa24.43■■□□□ 1.5
LSM4-201ENST00000252816 CAMK4Q16566 473 aa24.43■■□□□ 1.5
LSM4-201ENST00000252816 DCAF17Q5H9S7 520 aaPredicted RBP24.43■■□□□ 1.5
LSM4-201ENST00000252816 TTI2Q6NXR4 508 aa24.43■■□□□ 1.5
LSM4-201ENST00000252816 PAQR9Q6ZVX9 377 aa24.43■■□□□ 1.5
LSM4-201ENST00000252816 CMTM8Q8IZV2 173 aa24.43■■□□□ 1.5
LSM4-201ENST00000252816 NELFBQ8WX92 580 aa24.43■■□□□ 1.5
LSM4-201ENST00000252816 MRPS31Q92665 395 aaKnown RBP24.43■■□□□ 1.5
LSM4-201ENST00000252816 DNASE1L2Q92874 299 aa24.43■■□□□ 1.5
LSM4-201ENST00000252816 FAM122AQ96E09 287 aa24.43■■□□□ 1.5
LSM4-201ENST00000252816 SHDQ96IW2 340 aa24.43■■□□□ 1.5
LSM4-201ENST00000252816 TNIP3Q96KP6 325 aa24.43■■□□□ 1.5
LSM4-201ENST00000252816 C8orf48Q96LL4 319 aa24.43■■□□□ 1.5
LSM4-201ENST00000252816 PRRX2Q99811 253 aa24.43■■□□□ 1.5
LSM4-201ENST00000252816 DENND4CQ5VZ89 1909 aa24.43■■□□□ 1.5
LSM4-201ENST00000252816 NUP210Q8TEM1 1887 aaPredicted RBP24.43■■□□□ 1.5
LSM4-201ENST00000252816 CACNA1HO95180 2353 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 SHISA7A6NL88 538 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 ARNTLO00327 626 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 GALR2O43603 387 aaPredicted RBP24.42■■□□□ 1.5
LSM4-201ENST00000252816 CD72P21854 359 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 DDX6P26196 483 aaKnown RBP eCLIP24.42■■□□□ 1.5
LSM4-201ENST00000252816 ANXA13P27216 316 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 PPP1R2P41236 205 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 NUBP1P53384 320 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 FCHO2Q0JRZ9 810 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 INCA1Q0VD86 236 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 CBWD6Q4V339 395 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 CBWD3Q5JTY5 395 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 CBWD5Q5RIA9 395 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 TCERG1LQ5VWI1 586 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 DENND5BQ6ZUT9 1274 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 MON1AQ86VX9 555 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 IRF7Q92985 503 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 CEP295NLQ96MC4 621 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 TWNKQ96RR1 684 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 NIF3L1Q9GZT8 377 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 OBP2AQ9NY56 170 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 ARMCX3Q9UH62 379 aaPredicted RBP24.42■■□□□ 1.5
LSM4-201ENST00000252816 ZMYM5Q9UJ78 669 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 CTNND2Q9UQB3 1225 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 OBSL1O75147 1896 aa24.42■■□□□ 1.5
LSM4-201ENST00000252816 GREB1Q4ZG55 1949 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 DPYSL4O14531 572 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 ZNF263O14978 683 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 STX10O60499 249 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 DCNP07585 359 aaKnown RBP24.41■■□□□ 1.5
LSM4-201ENST00000252816 NHLH1Q02575 133 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 TPRG1Q6ZUI0 275 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 FAM35AQ86V20 835 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 UNC93AQ86WB7 457 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 FUKQ8N0W3 1084 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 CRYBG2Q8N1P7 616 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 FBXL13Q8NEE6 735 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 PJA1Q8NG27 643 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 SLC35C1Q96A29 364 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 CEP63Q96MT8 703 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 TTLL2Q9BWV7 592 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 CYP3A43Q9HB55 503 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 TRPV5Q9NQA5 729 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 RAB20Q9NX57 234 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 KIAA1468Q9P260 1216 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 CCL26Q9Y258 94 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 SIT1Q9Y3P8 196 aa24.41■■□□□ 1.5
LSM4-201ENST00000252816 MTF2Q9Y483 593 aaPredicted RBP24.41■■□□□ 1.5
LSM4-201ENST00000252816 KANSL1LA0AUZ9 987 aa24.4■■□□□ 1.5
LSM4-201ENST00000252816 CCDC130P13994 396 aa24.4■■□□□ 1.5
LSM4-201ENST00000252816 PTPN5P54829 565 aa24.4■■□□□ 1.5
LSM4-201ENST00000252816 FILIP1Q7Z7B0 1213 aa24.4■■□□□ 1.5
LSM4-201ENST00000252816 YAF2Q8IY57 180 aa24.4■■□□□ 1.5
LSM4-201ENST00000252816 CCDC105Q8IYK2 499 aa24.4■■□□□ 1.5
LSM4-201ENST00000252816 C12orf29Q8N999 325 aa24.4■■□□□ 1.5
LSM4-201ENST00000252816 USP13Q92995 863 aaPredicted RBP24.4■■□□□ 1.5
LSM4-201ENST00000252816 ZFYVE19Q96K21 471 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms