RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 LRRC34Q8IZ02 419 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 TMEM130Q8N3G9 435 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 EMC1Q8N766 993 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 CCDC197Q8NCU1 140 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 NLRP7Q8WX94 980 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 MAML1Q92585 1016 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 HEXIM2Q96MH2 286 aaKnown RBP16.99■□□□□ 0.31
UBE3D-201ENST00000237186 TMEM121Q9BTD3 319 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 OSBPL7Q9BZF2 842 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 ACTR5Q9H9F9 607 aaPredicted RBP16.99■□□□□ 0.31
UBE3D-201ENST00000237186 PPCSQ9HAB8 311 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 PLEKHA5Q9HAU0 1116 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 SAYSD1Q9NPB0 183 aa16.99■□□□□ 0.31
UBE3D-201ENST00000237186 M0QYV0 167 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 SMAPO00193 183 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 CST8O60676 142 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 RNF8O76064 485 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 CREB1P16220 341 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 MIPP30301 263 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 NDST1P52848 882 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 PLCB3Q01970 1234 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 ACTN3Q08043 901 aaPredicted RBP16.98■□□□□ 0.31
UBE3D-201ENST00000237186 NR1H3Q13133 447 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 ORC1Q13415 861 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 DCAF4L1Q3SXM0 396 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 TTC31Q49AM3 519 aaPredicted RBP16.98■□□□□ 0.31
UBE3D-201ENST00000237186 ANKRD23Q86SG2 305 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 CYP4X1Q8N118 509 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 PRCCQ92733 491 aaPredicted RBP16.98■□□□□ 0.31
UBE3D-201ENST00000237186 CNPY3Q9BT09 278 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 NT5C1AQ9BXI3 368 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 KDM4CQ9H3R0 1056 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 ZWILCHQ9H900 591 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 CTNNAL1Q9UBT7 734 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 USP18Q9UMW8 372 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 ANK1P16157 1881 aa16.98■□□□□ 0.31
UBE3D-201ENST00000237186 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.97■□□□□ 0.31
UBE3D-201ENST00000237186 RRN3P2A6NIE6 340 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 BTBD19C9JJ37 291 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 BRAFP15056 766 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 KCNT1Q5JUK3 1230 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 RNF187Q5TA31 235 aaPredicted RBP16.97■□□□□ 0.31
UBE3D-201ENST00000237186 CHADLQ6NUI6 762 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 PACS2Q86VP3 889 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 HAUS1Q96CS2 278 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 RSAD1Q9HA92 442 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 C2CD4BA6NLJ0 364 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 APOC4-APOC2K7ER74 178 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 SGK1O00141 431 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 APOC2P02655 101 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 MMP3P08254 477 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 GHRP10912 638 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 SMPD1P17405 629 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 CYP3A5P20815 502 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 GTF2A2P52657 109 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 MPP2Q14168 576 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 GRB14Q14449 540 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 PCBP1Q15365 356 aaKnown RBP eCLIP16.97■□□□□ 0.31
UBE3D-201ENST00000237186 SMTNL2Q2TAL5 461 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 IQSEC1Q6DN90 963 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 CENPUQ71F23 418 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 TAX1BP1Q86VP1 789 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 ANKS4BQ8N8V4 417 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 KCTD6Q8NC69 237 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 CKAP2Q8WWK9 683 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 CCT6BQ92526 530 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 PPP1R16BQ96T49 567 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 NSRP1Q9H0G5 558 aaKnown RBP16.97■□□□□ 0.31
UBE3D-201ENST00000237186 UBN1Q9NPG3 1134 aa16.97■□□□□ 0.31
UBE3D-201ENST00000237186 MCM3APO60318 1980 aa16.96■□□□□ 0.31
UBE3D-201ENST00000237186 GOLGA6L7A0A1B0GV03 622 aa16.96■□□□□ 0.31
UBE3D-201ENST00000237186 GCAP28676 217 aa16.96■□□□□ 0.31
UBE3D-201ENST00000237186 HOXA11P31270 313 aaPredicted RBP16.96■□□□□ 0.31
UBE3D-201ENST00000237186 SLC18A1P54219 525 aa16.96■□□□□ 0.31
UBE3D-201ENST00000237186 ZBTB6Q15916 424 aa16.96■□□□□ 0.31
UBE3D-201ENST00000237186 DGKDQ16760 1214 aa16.96■□□□□ 0.31
UBE3D-201ENST00000237186 PKDCCQ504Y2 493 aa16.96■□□□□ 0.31
UBE3D-201ENST00000237186 APBB1IPQ7Z5R6 666 aaPredicted RBP16.96■□□□□ 0.31
UBE3D-201ENST00000237186 PPIL6Q8IXY8 311 aa16.96■□□□□ 0.31
UBE3D-201ENST00000237186 NAT8LQ8N9F0 302 aa16.96■□□□□ 0.31
UBE3D-201ENST00000237186 KIF12Q96FN5 646 aa16.96■□□□□ 0.31
UBE3D-201ENST00000237186 MAML3Q96JK9 1138 aa16.96■□□□□ 0.31
UBE3D-201ENST00000237186 ADAMTS10Q9H324 1103 aa16.96■□□□□ 0.31
UBE3D-201ENST00000237186 ABHD16BQ9H3Z7 469 aa16.96■□□□□ 0.31
UBE3D-201ENST00000237186 GBA2Q9HCG7 927 aaPredicted RBP16.96■□□□□ 0.31
UBE3D-201ENST00000237186 FETUBQ9UGM5 382 aa16.96■□□□□ 0.31
UBE3D-201ENST00000237186 TSPAN16Q9UKR8 245 aa16.96■□□□□ 0.31
UBE3D-201ENST00000237186 CCL15-CCL14A0A0B4J2E2 113 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 IFNB1P01574 187 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 PFKMP08237 780 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 CD48P09326 243 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 SETSIPP0DME0 302 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 GPD1P21695 349 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 CCL15Q16663 113 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 ANKRD20A8PQ5CZ79 823 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 FAM102AQ5T9C2 384 aaPredicted RBP16.95■□□□□ 0.3
UBE3D-201ENST00000237186 CYP4F22Q6NT55 531 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 ARHGEF18Q6ZSZ5 1173 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 CYP4V2Q6ZWL3 525 aaPredicted RBP16.95■□□□□ 0.3
UBE3D-201ENST00000237186 GPR142Q7Z601 462 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms