RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 PI4K2AQ9BTU6 479 aa19.26■□□□□ 0.67
PFN1-201ENST00000225655 SLC46A2Q9BY10 475 aa19.26■□□□□ 0.67
PFN1-201ENST00000225655 C8orf33Q9H7E9 229 aaPredicted RBP19.26■□□□□ 0.67
PFN1-201ENST00000225655 R3HCC1Q9Y3T6 440 aaKnown RBP19.26■□□□□ 0.67
PFN1-201ENST00000225655 ZNF292O60281 2723 aa19.26■□□□□ 0.67
PFN1-201ENST00000225655 KIF26AQ9ULI4 1882 aaPredicted RBP19.25■□□□□ 0.67
PFN1-201ENST00000225655 SOBPA7XYQ1 873 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 GABRDO14764 452 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 EPB41P11171 864 aaKnown RBP19.25■□□□□ 0.67
PFN1-201ENST00000225655 KRT13P13646 458 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 ACAT1P24752 427 aaKnown RBP19.25■□□□□ 0.67
PFN1-201ENST00000225655 PCSK1P29120 753 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 PSMC2P35998 433 aaKnown RBP19.25■□□□□ 0.67
PFN1-201ENST00000225655 KPNA1P52294 538 aaPredicted RBP19.25■□□□□ 0.67
PFN1-201ENST00000225655 LMBRD2Q68DH5 695 aaPredicted RBP19.25■□□□□ 0.67
PFN1-201ENST00000225655 ANKRD40Q6AI12 368 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 DPH6Q7L8W6 267 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 LIMS2Q7Z4I7 341 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 TMEM150AQ86TG1 271 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 WDR49Q8IV35 697 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 ADGRF2Q8IZF7 708 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 ZBTB44Q8NCP5 570 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 BPIFB1Q8TDL5 484 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 HPDLQ96IR7 371 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 CEP63Q96MT8 703 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 FNBP1Q96RU3 617 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 LMAN1LQ9HAT1 526 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 DMAC2Q9NW81 257 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 ZSCAN32Q9NX65 697 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 OTOGLQ3ZCN5 2332 aa19.25■□□□□ 0.67
PFN1-201ENST00000225655 SLC38A8A6NNN8 435 aa19.24■□□□□ 0.67
PFN1-201ENST00000225655 MAPK13O15264 365 aa19.24■□□□□ 0.67
PFN1-201ENST00000225655 SLC16A3O15427 465 aaKnown RBP19.24■□□□□ 0.67
PFN1-201ENST00000225655 F11P03951 625 aa19.24■□□□□ 0.67
PFN1-201ENST00000225655 CSH1P0DML2 217 aa19.24■□□□□ 0.67
PFN1-201ENST00000225655 CSH2P0DML3 217 aa19.24■□□□□ 0.67
PFN1-201ENST00000225655 CHRNB1P11230 501 aa19.24■□□□□ 0.67
PFN1-201ENST00000225655 DDX6P26196 483 aaKnown RBP eCLIP19.24■□□□□ 0.671e-48■■□□□ 11.8
PFN1-201ENST00000225655 RPL10AP62906 217 aaKnown RBP19.24■□□□□ 0.67
PFN1-201ENST00000225655 PLCB2Q00722 1185 aa19.24■□□□□ 0.67
PFN1-201ENST00000225655 TYRO3Q06418 890 aa19.24■□□□□ 0.67
PFN1-201ENST00000225655 CFAP221Q4G0U5 840 aa19.24■□□□□ 0.67
PFN1-201ENST00000225655 OSTM1Q86WC4 334 aa19.24■□□□□ 0.67
PFN1-201ENST00000225655 RALGPS2Q86X27 583 aaPredicted RBP19.24■□□□□ 0.67
PFN1-201ENST00000225655 CMTM8Q8IZV2 173 aa19.24■□□□□ 0.67
PFN1-201ENST00000225655 CELF5Q8N6W0 485 aaKnown RBP19.24■□□□□ 0.67
PFN1-201ENST00000225655 SUMF1Q8NBK3 374 aa19.24■□□□□ 0.67
PFN1-201ENST00000225655 RDH13Q8NBN7 331 aa19.24■□□□□ 0.67
PFN1-201ENST00000225655 ATRIPQ8WXE1 791 aa19.24■□□□□ 0.67
PFN1-201ENST00000225655 FAM126AQ9BYI3 521 aaPredicted RBP19.24■□□□□ 0.67
PFN1-201ENST00000225655 GTF3C4Q9UKN8 822 aa19.24■□□□□ 0.67
PFN1-201ENST00000225655 ZNF638Q14966 1978 aaKnown RBP19.23■□□□□ 0.67
PFN1-201ENST00000225655 SYCE3A1L190 88 aa19.23■□□□□ 0.67
PFN1-201ENST00000225655 MYBPHLA2RUH7 354 aa19.23■□□□□ 0.67
PFN1-201ENST00000225655 TRIM49BA6NDI0 452 aa19.23■□□□□ 0.67
PFN1-201ENST00000225655 GNA14O95837 355 aa19.23■□□□□ 0.67
PFN1-201ENST00000225655 CYP2F1P24903 491 aa19.23■□□□□ 0.67
PFN1-201ENST00000225655 GPR15P49685 360 aa19.23■□□□□ 0.67
PFN1-201ENST00000225655 STX17P56962 302 aa19.23■□□□□ 0.67
PFN1-201ENST00000225655 INTS8Q75QN2 995 aaKnown RBP19.23■□□□□ 0.67
PFN1-201ENST00000225655 FAM186BQ8IYM0 893 aa19.23■□□□□ 0.67
PFN1-201ENST00000225655 TRMT2BQ96GJ1 504 aaKnown RBP19.23■□□□□ 0.67
PFN1-201ENST00000225655 FUBP3Q96I24 572 aaKnown RBP eCLIP19.23■□□□□ 0.67
PFN1-201ENST00000225655 ZFYVE19Q96K21 471 aa19.23■□□□□ 0.67
PFN1-201ENST00000225655 THG1LQ9NWX6 298 aaKnown RBP19.23■□□□□ 0.67
PFN1-201ENST00000225655 GTSE1Q9NYZ3 720 aa19.23■□□□□ 0.67
PFN1-201ENST00000225655 SPECC1L-ADORA2AF8WAN1 911 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 HCRTO43612 131 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 LILRB5O75023 590 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 NOL4O94818 638 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 TDGF1P13385 188 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 CTHP32929 405 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 AVPR1AP37288 418 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 SOX9P48436 509 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 CCR3P51677 355 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 CYP24A1Q07973 514 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 PPP2R5DQ14738 602 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 PSMD6Q15008 389 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 DDR2Q16832 855 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 ZSCAN23Q3MJ62 389 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 SDHAF4Q5VUM1 108 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 TTI2Q6NXR4 508 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 FAM171BQ6P995 826 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 TSSK4Q6SA08 328 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 SPATA2LQ8IUW3 424 aaPredicted RBP19.22■□□□□ 0.67
PFN1-201ENST00000225655 KBTBD7Q8WVZ9 684 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 RUBCNQ92622 972 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 MYRFLQ96LU7 910 aa19.22■□□□□ 0.67
PFN1-201ENST00000225655 SMG9Q9H0W8 520 aaKnown RBP19.22■□□□□ 0.67
PFN1-201ENST00000225655 METTL14Q9HCE5 456 aaKnown RBP19.22■□□□□ 0.67
PFN1-201ENST00000225655 UXTQ9UBK9 157 aaPredicted RBP19.22■□□□□ 0.67
PFN1-201ENST00000225655 MAGED2Q9UNF1 606 aaPredicted RBP19.22■□□□□ 0.67
PFN1-201ENST00000225655 STX10O60499 249 aa19.21■□□□□ 0.67
PFN1-201ENST00000225655 CAVIN2O95810 425 aa19.21■□□□□ 0.67
PFN1-201ENST00000225655 MAGEA11P43364 429 aa19.21■□□□□ 0.67
PFN1-201ENST00000225655 AP3M2P53677 418 aa19.21■□□□□ 0.67
PFN1-201ENST00000225655 PMS1P54277 932 aaKnown RBP19.21■□□□□ 0.67
PFN1-201ENST00000225655 ENPEPQ07075 957 aa19.21■□□□□ 0.67
PFN1-201ENST00000225655 LRRC32Q14392 662 aa19.21■□□□□ 0.67
PFN1-201ENST00000225655 CCDC40Q4G0X9 1142 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms