RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 SCN4BQ8IWT1 228 aa18.48■□□□□ 0.55
PHGDH-227ENST00000641811 LEMD2Q8NC56 503 aa18.48■□□□□ 0.55
PHGDH-227ENST00000641811 MYCBPAPQ8TBZ2 947 aa18.48■□□□□ 0.55
PHGDH-227ENST00000641811 PCED1BQ96HM7 432 aa18.48■□□□□ 0.55
PHGDH-227ENST00000641811 CEP63Q96MT8 703 aa18.48■□□□□ 0.55
PHGDH-227ENST00000641811 MAGEC2Q9UBF1 373 aaPredicted RBP18.48■□□□□ 0.55
PHGDH-227ENST00000641811 BICDL2A1A5D9 508 aa18.47■□□□□ 0.55
PHGDH-227ENST00000641811 STX10O60499 249 aa18.47■□□□□ 0.55
PHGDH-227ENST00000641811 MICAL2O94851 1124 aa18.47■□□□□ 0.55
PHGDH-227ENST00000641811 P4HA1P13674 534 aa18.47■□□□□ 0.55
PHGDH-227ENST00000641811 HMGA1P17096 107 aaKnown RBP18.47■□□□□ 0.55
PHGDH-227ENST00000641811 GABRR2P28476 465 aa18.47■□□□□ 0.55
PHGDH-227ENST00000641811 NOP14P78316 857 aaKnown RBP18.47■□□□□ 0.55
PHGDH-227ENST00000641811 MAPRE1Q15691 268 aaKnown RBP18.47■□□□□ 0.55
PHGDH-227ENST00000641811 TAF12Q16514 161 aa18.47■□□□□ 0.55
PHGDH-227ENST00000641811 CCDC40Q4G0X9 1142 aa18.47■□□□□ 0.55
PHGDH-227ENST00000641811 FAM78AQ5JUQ0 283 aa18.47■□□□□ 0.55
PHGDH-227ENST00000641811 C4orf50Q6ZRC1 276 aa18.47■□□□□ 0.55
PHGDH-227ENST00000641811 B3GALNT2Q8NCR0 500 aa18.47■□□□□ 0.55
PHGDH-227ENST00000641811 GPT2Q8TD30 523 aa18.47■□□□□ 0.55
PHGDH-227ENST00000641811 NXPE3Q969Y0 559 aa18.47■□□□□ 0.55
PHGDH-227ENST00000641811 SLC35C1Q96A29 364 aa18.47■□□□□ 0.55
PHGDH-227ENST00000641811 FUBP3Q96I24 572 aaKnown RBP eCLIP18.47■□□□□ 0.55
PHGDH-227ENST00000641811 IMPG2Q9BZV3 1241 aa18.47■□□□□ 0.55
PHGDH-227ENST00000641811 NUP62CLQ9H1M0 184 aa18.47■□□□□ 0.55
PHGDH-227ENST00000641811 IL21Q9HBE4 155 aa18.47■□□□□ 0.55
PHGDH-227ENST00000641811 HMGXB4Q9UGU5 601 aa18.47■□□□□ 0.55
PHGDH-227ENST00000641811 MAGED2Q9UNF1 606 aaPredicted RBP18.47■□□□□ 0.55
PHGDH-227ENST00000641811 PRR33A8MZF0 331 aa18.46■□□□□ 0.55
PHGDH-227ENST00000641811 CLDN5O00501 218 aa18.46■□□□□ 0.55
PHGDH-227ENST00000641811 PDGFBP01127 241 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-227ENST00000641811 MAGEA11P43364 429 aa18.46■□□□□ 0.55
PHGDH-227ENST00000641811 NDST1P52848 882 aa18.46■□□□□ 0.55
PHGDH-227ENST00000641811 RPL10AP62906 217 aaKnown RBP18.46■□□□□ 0.55
PHGDH-227ENST00000641811 TANGO2Q6ICL3 276 aa18.46■□□□□ 0.55
PHGDH-227ENST00000641811 MTSS1LQ765P7 747 aa18.46■□□□□ 0.55
PHGDH-227ENST00000641811 FRMD5Q7Z6J6 570 aa18.46■□□□□ 0.55
PHGDH-227ENST00000641811 ACOT1Q86TX2 421 aa18.46■□□□□ 0.55
PHGDH-227ENST00000641811 GPIHBP1Q8IV16 184 aa18.46■□□□□ 0.55
PHGDH-227ENST00000641811 FBXL13Q8NEE6 735 aa18.46■□□□□ 0.55
PHGDH-227ENST00000641811 MED15Q96RN5 788 aa18.46■□□□□ 0.55
PHGDH-227ENST00000641811 SRRTQ9BXP5 876 aaKnown RBP18.46■□□□□ 0.55
PHGDH-227ENST00000641811 B3GNT5Q9BYG0 378 aa18.46■□□□□ 0.55
PHGDH-227ENST00000641811 BCO2Q9BYV7 579 aa18.46■□□□□ 0.55
PHGDH-227ENST00000641811 PLA2G2FQ9BZM2 168 aa18.46■□□□□ 0.55
PHGDH-227ENST00000641811 ATXN3LQ9H3M9 355 aa18.46■□□□□ 0.55
PHGDH-227ENST00000641811 SLITRK6Q9H5Y7 841 aa18.46■□□□□ 0.55
PHGDH-227ENST00000641811 RAB20Q9NX57 234 aa18.46■□□□□ 0.55
PHGDH-227ENST00000641811 DUSP12Q9UNI6 340 aa18.46■□□□□ 0.55
PHGDH-227ENST00000641811 SLC38A8A6NNN8 435 aa18.45■□□□□ 0.54
PHGDH-227ENST00000641811 CFHP08603 1231 aa18.45■□□□□ 0.54
PHGDH-227ENST00000641811 FCARP24071 287 aa18.45■□□□□ 0.54
PHGDH-227ENST00000641811 CACNA2D1P54289 1103 aa18.45■□□□□ 0.54
PHGDH-227ENST00000641811 CYP4F8P98187 520 aa18.45■□□□□ 0.54
PHGDH-227ENST00000641811 FOXR2Q6PJQ5 311 aa18.45■□□□□ 0.54
PHGDH-227ENST00000641811 TATDN2Q93075 761 aa18.45■□□□□ 0.54
PHGDH-227ENST00000641811 PBXIP1Q96AQ6 731 aa18.45■□□□□ 0.54
PHGDH-227ENST00000641811 ASB16Q96NS5 453 aa18.45■□□□□ 0.54
PHGDH-227ENST00000641811 ZNF518BQ9C0D4 1074 aa18.45■□□□□ 0.54
PHGDH-227ENST00000641811 NIF3L1Q9GZT8 377 aa18.45■□□□□ 0.54
PHGDH-227ENST00000641811 METTL14Q9HCE5 456 aaKnown RBP18.45■□□□□ 0.54
PHGDH-227ENST00000641811 TMEM30AQ9NV96 361 aa18.45■□□□□ 0.54
PHGDH-227ENST00000641811 CSH1P0DML2 217 aa18.44■□□□□ 0.54
PHGDH-227ENST00000641811 CSH2P0DML3 217 aa18.44■□□□□ 0.54
PHGDH-227ENST00000641811 CD58P19256 250 aa18.44■□□□□ 0.54
PHGDH-227ENST00000641811 GRIK1P39086 918 aa18.44■□□□□ 0.54
PHGDH-227ENST00000641811 VIPR2P41587 438 aa18.44■□□□□ 0.54
PHGDH-227ENST00000641811 GPC5P78333 572 aa18.44■□□□□ 0.54
PHGDH-227ENST00000641811 TMEM150AQ86TG1 271 aa18.44■□□□□ 0.54
PHGDH-227ENST00000641811 CCDC150Q8NCX0 1101 aa18.44■□□□□ 0.54
PHGDH-227ENST00000641811 ZSCAN18Q8TBC5 510 aaPredicted RBP18.44■□□□□ 0.54
PHGDH-227ENST00000641811 TWNKQ96RR1 684 aa18.44■□□□□ 0.54
PHGDH-227ENST00000641811 RAPGEFL1Q9UHV5 662 aa18.44■□□□□ 0.54
PHGDH-227ENST00000641811 RWDD2AQ9UIY3 292 aa18.44■□□□□ 0.54
PHGDH-227ENST00000641811 F8VP50 259 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 ECI2O75521 394 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 FGF19O95750 216 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 F11P03951 625 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 SRFP11831 508 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 FMO5P49326 533 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 NLRP12P59046 1061 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 DPCR1Q3MIW9 517 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 GPR158Q5T848 1215 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 VSTM1Q6UX27 236 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 PAQR9Q6ZVX9 377 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 MLKLQ8NB16 471 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 SMARCD2Q92925 531 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 TNIP3Q96KP6 325 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 ARID3AQ99856 593 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 MED10Q9BTT4 135 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 CYP3A43Q9HB55 503 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 FBXL21Q9UKT6 434 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 COQ4Q9Y3A0 265 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 NCANO14594 1321 aa18.43■□□□□ 0.54
PHGDH-227ENST00000641811 GOLGA6L22H0YM25 854 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 NOL4O94818 638 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 CCDC130P13994 396 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 CDC25CP30307 473 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 INCA1Q0VD86 236 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 GRM2Q14416 872 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms