RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 VPS37CA5D8V6 355 aaPredicted RBP18.78■□□□□ 0.6
RETREG3-212ENST00000593251 HUS1O60921 280 aa18.78■□□□□ 0.6
RETREG3-212ENST00000593251 ATG13O75143 517 aa18.78■□□□□ 0.6
RETREG3-212ENST00000593251 EPN2O95208 641 aa18.78■□□□□ 0.6
RETREG3-212ENST00000593251 GCNT3O95395 438 aa18.78■□□□□ 0.6
RETREG3-212ENST00000593251 GJA4P35212 333 aa18.78■□□□□ 0.6
RETREG3-212ENST00000593251 RAP1GAPP47736 663 aa18.78■□□□□ 0.6
RETREG3-212ENST00000593251 INTS6LQ5JSJ4 861 aaKnown RBP18.78■□□□□ 0.6
RETREG3-212ENST00000593251 L1TD1Q5T7N2 865 aaKnown RBP18.78■□□□□ 0.6
RETREG3-212ENST00000593251 IL31Q6EBC2 164 aa18.78■□□□□ 0.6
RETREG3-212ENST00000593251 CSGALNACT2Q8N6G5 542 aa18.78■□□□□ 0.6
RETREG3-212ENST00000593251 C12orf50Q8NA57 414 aaPredicted RBP18.78■□□□□ 0.6
RETREG3-212ENST00000593251 DNAJC19Q96DA6 116 aa18.78■□□□□ 0.6
RETREG3-212ENST00000593251 CLIC6Q96NY7 704 aa18.78■□□□□ 0.6
RETREG3-212ENST00000593251 ACBD6Q9BR61 282 aa18.78■□□□□ 0.6
RETREG3-212ENST00000593251 FGFBP2Q9BYJ0 223 aa18.78■□□□□ 0.6
RETREG3-212ENST00000593251 RBAKQ9NYW8 714 aaPredicted RBP18.78■□□□□ 0.6
RETREG3-212ENST00000593251 STK17AQ9UEE5 414 aa18.78■□□□□ 0.6
RETREG3-212ENST00000593251 CCDC39Q9UFE4 941 aa18.78■□□□□ 0.6
RETREG3-212ENST00000593251 EXOC7Q9UPT5 735 aa18.78■□□□□ 0.6
RETREG3-212ENST00000593251 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.78■□□□□ 0.6
RETREG3-212ENST00000593251 NUP205Q92621 2012 aa18.78■□□□□ 0.6
RETREG3-212ENST00000593251 CNOT1A5YKK6 2376 aaKnown RBP18.77■□□□□ 0.6
RETREG3-212ENST00000593251 FOXD2O60548 495 aaPredicted RBP18.77■□□□□ 0.6
RETREG3-212ENST00000593251 KRT19P08727 400 aa18.77■□□□□ 0.6
RETREG3-212ENST00000593251 ZNF806P0C7X5 589 aa18.77■□□□□ 0.6
RETREG3-212ENST00000593251 RPL10AP62906 217 aaKnown RBP18.77■□□□□ 0.6
RETREG3-212ENST00000593251 MYL7Q01449 175 aa18.77■□□□□ 0.6
RETREG3-212ENST00000593251 ZNF268Q14587 947 aaPredicted RBP18.77■□□□□ 0.6
RETREG3-212ENST00000593251 MTF1Q14872 753 aa18.77■□□□□ 0.6
RETREG3-212ENST00000593251 RPLP0P6Q8NHW5 317 aa18.77■□□□□ 0.6
RETREG3-212ENST00000593251 CXorf38Q8TB03 319 aa18.77■□□□□ 0.6
RETREG3-212ENST00000593251 LEO1Q8WVC0 666 aaPredicted RBP18.77■□□□□ 0.6
RETREG3-212ENST00000593251 EZH1Q92800 747 aaPredicted RBP18.77■□□□□ 0.6
RETREG3-212ENST00000593251 PKMYT1Q99640 499 aa18.77■□□□□ 0.6
RETREG3-212ENST00000593251 P2RY13Q9BPV8 354 aa18.77■□□□□ 0.6
RETREG3-212ENST00000593251 PCIF1Q9H4Z3 704 aa18.77■□□□□ 0.6
RETREG3-212ENST00000593251 FBXO2Q9UK22 296 aaPredicted RBP18.77■□□□□ 0.6
RETREG3-212ENST00000593251 SNX9Q9Y5X1 595 aa18.77■□□□□ 0.6
RETREG3-212ENST00000593251 WNT6Q9Y6F9 365 aa18.77■□□□□ 0.6
RETREG3-212ENST00000593251 THADAQ6YHU6 1953 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 CCDC163A0A0D9SF12 145 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 NOL4O94818 638 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 CKMP06732 381 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 IDEP14735 1019 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 GAP43P17677 238 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 DRD1P21728 446 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 AMPD2Q01433 879 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 FAM160A1Q05DH4 1040 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 PDGFRLQ15198 375 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 ZNF77Q15935 545 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 ST3GAL2Q16842 350 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 RRAGBQ5VZM2 374 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 LMBRD2Q68DH5 695 aaPredicted RBP18.76■□□□□ 0.59
RETREG3-212ENST00000593251 SV2BQ7L1I2 683 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 SCN4BQ8IWT1 228 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 SYCP3Q8IZU3 236 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 CPA6Q8N4T0 437 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 CACTINQ8WUQ7 758 aaKnown RBP18.76■□□□□ 0.59
RETREG3-212ENST00000593251 LOXL4Q96JB6 756 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 CHAMP1Q96JM3 812 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 CBWD1Q9BRT8 395 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 ECT2Q9H8V3 914 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 PDE11AQ9HCR9 933 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 DUS2Q9NX74 493 aaKnown RBP18.76■□□□□ 0.59
RETREG3-212ENST00000593251 UXTQ9UBK9 157 aaPredicted RBP18.76■□□□□ 0.59
RETREG3-212ENST00000593251 SEL1LQ9UBV2 794 aa18.76■□□□□ 0.59
RETREG3-212ENST00000593251 C2orf78A6NCI8 922 aa18.75■□□□□ 0.59
RETREG3-212ENST00000593251 SOBPA7XYQ1 873 aa18.75■□□□□ 0.59
RETREG3-212ENST00000593251 ATP2C2O75185 946 aa18.75■□□□□ 0.59
RETREG3-212ENST00000593251 IFNAR2P48551 515 aa18.75■□□□□ 0.59
RETREG3-212ENST00000593251 CEBPZQ03701 1054 aaKnown RBP18.75■□□□□ 0.59
RETREG3-212ENST00000593251 PSMD2Q13200 908 aa18.75■□□□□ 0.59
RETREG3-212ENST00000593251 FAM173BQ6P4H8 233 aa18.75■□□□□ 0.59
RETREG3-212ENST00000593251 SPATA2LQ8IUW3 424 aaPredicted RBP18.75■□□□□ 0.59
RETREG3-212ENST00000593251 ADGRF2Q8IZF7 708 aa18.75■□□□□ 0.59
RETREG3-212ENST00000593251 TMEM86AQ8N2M4 240 aa18.75■□□□□ 0.59
RETREG3-212ENST00000593251 LRRC52Q8N7C0 313 aa18.75■□□□□ 0.59
RETREG3-212ENST00000593251 ARL14EPQ8N8R7 260 aaPredicted RBP18.75■□□□□ 0.59
RETREG3-212ENST00000593251 OSCP1Q8WVF1 389 aa18.75■□□□□ 0.59
RETREG3-212ENST00000593251 TRMT2BQ96GJ1 504 aaKnown RBP18.75■□□□□ 0.59
RETREG3-212ENST00000593251 MYRFLQ96LU7 910 aa18.75■□□□□ 0.59
RETREG3-212ENST00000593251 PANK2Q9BZ23 570 aa18.75■□□□□ 0.59
RETREG3-212ENST00000593251 MTMR12Q9C0I1 747 aa18.75■□□□□ 0.59
RETREG3-212ENST00000593251 ABCB6Q9NP58 842 aa18.75■□□□□ 0.59
RETREG3-212ENST00000593251 GDAP2Q9NXN4 497 aa18.75■□□□□ 0.59
RETREG3-212ENST00000593251 SIX4Q9UIU6 781 aa18.75■□□□□ 0.59
RETREG3-212ENST00000593251 ITGA11Q9UKX5 1188 aa18.75■□□□□ 0.59
RETREG3-212ENST00000593251 MYOFQ9NZM1 2061 aa18.74■□□□□ 0.59
RETREG3-212ENST00000593251 TRAV19A0A0A6YYK7 116 aa18.74■□□□□ 0.59
RETREG3-212ENST00000593251 DCLK1O15075 740 aa18.74■□□□□ 0.59
RETREG3-212ENST00000593251 PRPF6O94906 941 aaKnown RBP18.74■□□□□ 0.59
RETREG3-212ENST00000593251 LDHAP00338 332 aaKnown RBP18.74■□□□□ 0.59
RETREG3-212ENST00000593251 USP17L7P0C7H9 530 aa18.74■□□□□ 0.59
RETREG3-212ENST00000593251 GARTP22102 1010 aa18.74■□□□□ 0.59
RETREG3-212ENST00000593251 MPLP40238 635 aa18.74■□□□□ 0.59
RETREG3-212ENST00000593251 LIMK1P53667 647 aa18.74■□□□□ 0.59
RETREG3-212ENST00000593251 USP4Q13107 963 aa18.74■□□□□ 0.59
RETREG3-212ENST00000593251 SOWAHAQ2M3V2 549 aa18.74■□□□□ 0.59
RETREG3-212ENST00000593251 PLK5Q496M5 336 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms