RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 JRKLQ9Y4A0 524 aa32.84■■■□□ 2.85
CAPNS1-206ENST00000588815 CTAGE9A4FU28 777 aa32.83■■■□□ 2.85
CAPNS1-206ENST00000588815 SLC8A3P57103 927 aa32.83■■■□□ 2.85
CAPNS1-206ENST00000588815 FUT10Q6P4F1 479 aa32.83■■■□□ 2.85
CAPNS1-206ENST00000588815 MYCBPAPQ8TBZ2 947 aa32.83■■■□□ 2.85
CAPNS1-206ENST00000588815 MKI67P46013 3256 aaKnown RBP32.83■■■□□ 2.85
CAPNS1-206ENST00000588815 ACAT1P24752 427 aaKnown RBP32.82■■■□□ 2.84
CAPNS1-206ENST00000588815 GABRB2P47870 512 aa32.82■■■□□ 2.84
CAPNS1-206ENST00000588815 PSMC1P62191 440 aaKnown RBP32.82■■■□□ 2.84
CAPNS1-206ENST00000588815 TSPY1Q01534 308 aa32.82■■■□□ 2.84
CAPNS1-206ENST00000588815 PDCLQ13371 301 aa32.82■■■□□ 2.84
CAPNS1-206ENST00000588815 INTS6LQ5JSJ4 861 aaKnown RBP32.82■■■□□ 2.84
CAPNS1-206ENST00000588815 TMEM240Q5SV17 173 aa32.82■■■□□ 2.84
CAPNS1-206ENST00000588815 PLEKHA7Q6IQ23 1121 aa32.82■■■□□ 2.84
CAPNS1-206ENST00000588815 TTC30AQ86WT1 665 aa32.82■■■□□ 2.84
CAPNS1-206ENST00000588815 IPO4Q8TEX9 1081 aaKnown RBP32.82■■■□□ 2.84
CAPNS1-206ENST00000588815 NAPGQ99747 312 aaPredicted RBP32.82■■■□□ 2.84
CAPNS1-206ENST00000588815 RTP3Q9BQQ7 232 aa32.82■■■□□ 2.84
CAPNS1-206ENST00000588815 NUP85Q9BW27 656 aa32.82■■■□□ 2.84
CAPNS1-206ENST00000588815 OXCT2Q9BYC2 517 aaPredicted RBP32.82■■■□□ 2.84
CAPNS1-206ENST00000588815 CRTAC1Q9NQ79 661 aa32.82■■■□□ 2.84
CAPNS1-206ENST00000588815 ZBBXA8MT70 800 aa32.81■■■□□ 2.84
CAPNS1-206ENST00000588815 CCDC130P13994 396 aa32.81■■■□□ 2.84
CAPNS1-206ENST00000588815 RRM1P23921 792 aa32.81■■■□□ 2.84
CAPNS1-206ENST00000588815 BTG3Q14201 252 aaPredicted RBP32.81■■■□□ 2.84
CAPNS1-206ENST00000588815 FAM171BQ6P995 826 aa32.81■■■□□ 2.84
CAPNS1-206ENST00000588815 ZNF564Q8TBZ8 553 aaPredicted RBP32.81■■■□□ 2.84
CAPNS1-206ENST00000588815 SLC2A14Q8TDB8 520 aa32.81■■■□□ 2.84
CAPNS1-206ENST00000588815 SLC35F5Q8WV83 523 aa32.81■■■□□ 2.84
CAPNS1-206ENST00000588815 C18orf8Q96DM3 657 aa32.81■■■□□ 2.84
CAPNS1-206ENST00000588815 OSGEPQ9NPF4 335 aa32.81■■■□□ 2.84
CAPNS1-206ENST00000588815 PARVAQ9NVD7 372 aa32.81■■■□□ 2.84
CAPNS1-206ENST00000588815 LCMT1Q9UIC8 334 aa32.81■■■□□ 2.84
CAPNS1-206ENST00000588815 LAG3P18627 525 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 FGFR3P22607 806 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 TAP1Q03518 808 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 PTPN20Q4JDL3 420 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 MDH1BQ5I0G3 518 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 KIAA0319Q5VV43 1072 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 FUKQ8N0W3 1084 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 UBA3Q8TBC4 463 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 HERVK_113Q902F9 699 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 MTIF3Q9H2K0 278 aaKnown RBP32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 HCSTQ9UBK5 93 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 CYTH4Q9UIA0 394 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 ATP2C2O75185 946 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 PALMO75781 387 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 TKTP29401 623 aaKnown RBP32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 ZNF268Q14587 947 aaPredicted RBP32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 FAM171A1Q5VUB5 890 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 SLFN11Q7Z7L1 901 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 C3orf20Q8ND61 904 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 ABHD8Q96I13 439 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 SLC9A7Q96T83 725 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 YME1L1Q96TA2 773 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 LBHD1Q9BQE6 289 aaPredicted RBP32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 DUSP16Q9BY84 665 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 SYNCQ9H7C4 482 aa32.8■■■□□ 2.84
CAPNS1-206ENST00000588815 PATJQ8NI35 1801 aa32.79■■■□□ 2.84
CAPNS1-206ENST00000588815 GRID2IPA4D2P6 1211 aa32.79■■■□□ 2.84
CAPNS1-206ENST00000588815 GJB5O95377 273 aa32.79■■■□□ 2.84
CAPNS1-206ENST00000588815 ADORA2BP29275 332 aa32.79■■■□□ 2.84
CAPNS1-206ENST00000588815 HTRA4P83105 476 aaPredicted RBP32.79■■■□□ 2.84
CAPNS1-206ENST00000588815 MRPL58Q14197 206 aaKnown RBP32.79■■■□□ 2.84
CAPNS1-206ENST00000588815 LRRC57Q8N9N7 239 aa32.79■■■□□ 2.84
CAPNS1-206ENST00000588815 PHOSPHO2Q8TCD6 241 aa32.79■■■□□ 2.84
CAPNS1-206ENST00000588815 HSFY1Q96LI6 401 aa32.79■■■□□ 2.84
CAPNS1-206ENST00000588815 ZNF558Q96NG5 402 aa32.79■■■□□ 2.84
CAPNS1-206ENST00000588815 CPXM1Q96SM3 734 aa32.79■■■□□ 2.84
CAPNS1-206ENST00000588815 BUD13Q9BRD0 619 aaKnown RBP eCLIP32.79■■■□□ 2.844e-6■□□□□ 9.2
CAPNS1-206ENST00000588815 GPR62Q9BZJ7 368 aa32.79■■■□□ 2.84
CAPNS1-206ENST00000588815 COG5Q9UP83 839 aa32.79■■■□□ 2.84
CAPNS1-206ENST00000588815 ATMINO43313 823 aaPredicted RBP32.78■■■□□ 2.84
CAPNS1-206ENST00000588815 PDE4CQ08493 712 aa32.78■■■□□ 2.84
CAPNS1-206ENST00000588815 C11orf63Q6NUN7 778 aa32.78■■■□□ 2.84
CAPNS1-206ENST00000588815 KCNT2Q6UVM3 1135 aa32.78■■■□□ 2.84
CAPNS1-206ENST00000588815 PKMYT1Q99640 499 aa32.78■■■□□ 2.84
CAPNS1-206ENST00000588815 SLC4A5Q9BY07 1137 aa32.78■■■□□ 2.84
CAPNS1-206ENST00000588815 MYBPHLA2RUH7 354 aa32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 XPO1O14980 1071 aaKnown RBP32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 FANCGO15287 622 aa32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 EFEMP2O95967 443 aa32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 NPR3P17342 541 aa32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 ACADSBP45954 432 aa32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 PLA2G4AP47712 749 aa32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 RPL34P49207 117 aaKnown RBP32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 TUBB2AQ13885 445 aa32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 VARS2Q5ST30 1063 aaKnown RBP32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 SPOUT1Q5T280 376 aaKnown RBP32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 ZNF280DQ6N043 979 aa32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 FAM117BQ6P1L5 589 aa32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 TMEM110Q86TL2 294 aa32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 DCP1BQ8IZD4 617 aaKnown RBP32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 PCED1BQ96HM7 432 aa32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 IGSF21Q96ID5 467 aa32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 LPIN3Q9BQK8 851 aa32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 MED10Q9BTT4 135 aa32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 TUBB2BQ9BVA1 445 aa32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 B3GNT5Q9BYG0 378 aa32.77■■■□□ 2.84
CAPNS1-206ENST00000588815 TCRBV5S1A1TA0A578 114 aa32.76■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms