RNA–Protein interactions for RNA: ENST00000582648.5

ERBB2-211, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-211ENST00000582648 CA14Q9ULX7 337 aa19.23■□□□□ 0.67
ERBB2-211ENST00000582648 ZDBF2Q9HCK1 2354 aa19.22■□□□□ 0.67
ERBB2-211ENST00000582648 KMT2EQ8IZD2 1858 aa19.22■□□□□ 0.67
ERBB2-211ENST00000582648 LRRN2O75325 713 aa19.22■□□□□ 0.67
ERBB2-211ENST00000582648 SRFP11831 508 aa19.22■□□□□ 0.67
ERBB2-211ENST00000582648 BDNFP23560 247 aa19.22■□□□□ 0.67
ERBB2-211ENST00000582648 FCARP24071 287 aa19.22■□□□□ 0.67
ERBB2-211ENST00000582648 PPP1R2P41236 205 aa19.22■□□□□ 0.67
ERBB2-211ENST00000582648 ASPAP45381 313 aa19.22■□□□□ 0.67
ERBB2-211ENST00000582648 RPL10AP62906 217 aaKnown RBP19.22■□□□□ 0.67
ERBB2-211ENST00000582648 MAPRE1Q15691 268 aaKnown RBP19.22■□□□□ 0.67
ERBB2-211ENST00000582648 CFAP221Q4G0U5 840 aa19.22■□□□□ 0.67
ERBB2-211ENST00000582648 KRT39Q6A163 491 aa19.22■□□□□ 0.67
ERBB2-211ENST00000582648 TANGO2Q6ICL3 276 aa19.22■□□□□ 0.67
ERBB2-211ENST00000582648 SUGP1Q8IWZ8 645 aaKnown RBP19.22■□□□□ 0.67
ERBB2-211ENST00000582648 B3GALNT2Q8NCR0 500 aa19.22■□□□□ 0.67
ERBB2-211ENST00000582648 ZSCAN18Q8TBC5 510 aaPredicted RBP19.22■□□□□ 0.67
ERBB2-211ENST00000582648 MYCBPAPQ8TBZ2 947 aa19.22■□□□□ 0.67
ERBB2-211ENST00000582648 TAF4BQ92750 862 aa19.22■□□□□ 0.67
ERBB2-211ENST00000582648 FUBP3Q96I24 572 aaKnown RBP eCLIP19.22■□□□□ 0.67
ERBB2-211ENST00000582648 APOBEC3GQ9HC16 384 aaKnown RBP19.22■□□□□ 0.67
ERBB2-211ENST00000582648 KIAA1468Q9P260 1216 aa19.22■□□□□ 0.67
ERBB2-211ENST00000582648 HMGXB4Q9UGU5 601 aa19.22■□□□□ 0.67
ERBB2-211ENST00000582648 NUP210Q8TEM1 1887 aaPredicted RBP19.22■□□□□ 0.67
ERBB2-211ENST00000582648 DENND4CQ5VZ89 1909 aa19.21■□□□□ 0.67
ERBB2-211ENST00000582648 COL4A3Q01955 1670 aa19.21■□□□□ 0.67
ERBB2-211ENST00000582648 MICAL2O94851 1124 aa19.21■□□□□ 0.67
ERBB2-211ENST00000582648 PTPN1P18031 435 aaKnown RBP19.21■□□□□ 0.67
ERBB2-211ENST00000582648 ENPEPQ07075 957 aa19.21■□□□□ 0.67
ERBB2-211ENST00000582648 PAK1Q13153 545 aa19.21■□□□□ 0.67
ERBB2-211ENST00000582648 GRM2Q14416 872 aa19.21■□□□□ 0.67
ERBB2-211ENST00000582648 CCDC40Q4G0X9 1142 aa19.21■□□□□ 0.67
ERBB2-211ENST00000582648 GPR158Q5T848 1215 aa19.21■□□□□ 0.67
ERBB2-211ENST00000582648 TTI2Q6NXR4 508 aa19.21■□□□□ 0.67
ERBB2-211ENST00000582648 GPIHBP1Q8IV16 184 aa19.21■□□□□ 0.67
ERBB2-211ENST00000582648 SIX5Q8N196 739 aa19.21■□□□□ 0.67
ERBB2-211ENST00000582648 ASB16Q96NS5 453 aa19.21■□□□□ 0.67
ERBB2-211ENST00000582648 DUSP9Q99956 384 aaKnown RBP19.21■□□□□ 0.67
ERBB2-211ENST00000582648 PLA2G2FQ9BZM2 168 aa19.21■□□□□ 0.67
ERBB2-211ENST00000582648 MFSD1Q9H3U5 465 aa19.21■□□□□ 0.67
ERBB2-211ENST00000582648 CLSTN2Q9H4D0 955 aa19.21■□□□□ 0.67
ERBB2-211ENST00000582648 IL21Q9HBE4 155 aa19.21■□□□□ 0.67
ERBB2-211ENST00000582648 ZNF318Q5VUA4 2279 aa19.21■□□□□ 0.67
ERBB2-211ENST00000582648 GREB1Q4ZG55 1949 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 SLC38A8A6NNN8 435 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 CLDN5O00501 218 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 HMGA1P17096 107 aaKnown RBP19.2■□□□□ 0.66
ERBB2-211ENST00000582648 CDC25CP30307 473 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 GTF2H1P32780 548 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 GRIK1P39086 918 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 VIPR2P41587 438 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 GPC5P78333 572 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 CBWD6Q4V339 395 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 ARHGAP15Q53QZ3 475 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 CBWD3Q5JTY5 395 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 CBWD5Q5RIA9 395 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 FBXL6Q8N531 539 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 CCDC150Q8NCX0 1101 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 FLCNQ8NFG4 579 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 SEMA4DQ92854 862 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 SMARCD2Q92925 531 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 GBP4Q96PP9 640 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 ZNF518BQ9C0D4 1074 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 NIF3L1Q9GZT8 377 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 ZFP14Q9HCL3 533 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 ARMCX3Q9UH62 379 aaPredicted RBP19.2■□□□□ 0.66
ERBB2-211ENST00000582648 HCN4Q9Y3Q4 1203 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 NCANO14594 1321 aa19.2■□□□□ 0.66
ERBB2-211ENST00000582648 BICDL2A1A5D9 508 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 STX10O60499 249 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 ECI2O75521 394 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 FGF19O95750 216 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 FAM163BP0C2L3 166 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 CSH1P0DML2 217 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 CSH2P0DML3 217 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 CD58P19256 250 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 MAGEA11P43364 429 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 NDST1P52848 882 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 CACNA2D1P54289 1103 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 VCPP55072 806 aaKnown RBP19.19■□□□□ 0.66
ERBB2-211ENST00000582648 CLEC17AQ6ZS10 378 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 BMP8AQ7Z5Y6 402 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 ACOT1Q86TX2 421 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 TRIML1Q8N9V2 468 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 FBXL13Q8NEE6 735 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 ELSPBP1Q96BH3 223 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 CEP63Q96MT8 703 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 MED10Q9BTT4 135 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 LMBRD1Q9NUN5 540 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 MYH10P35580 1976 aa19.19■□□□□ 0.66
ERBB2-211ENST00000582648 ZNF638Q14966 1978 aaKnown RBP19.19■□□□□ 0.66
ERBB2-211ENST00000582648 NOL4O94818 638 aa19.18■□□□□ 0.66
ERBB2-211ENST00000582648 RFX1P22670 979 aa19.18■□□□□ 0.66
ERBB2-211ENST00000582648 ANXA13P27216 316 aa19.18■□□□□ 0.66
ERBB2-211ENST00000582648 IER5LQ5T953 404 aa19.18■□□□□ 0.66
ERBB2-211ENST00000582648 VSTM1Q6UX27 236 aa19.18■□□□□ 0.66
ERBB2-211ENST00000582648 SLC35C1Q96A29 364 aa19.18■□□□□ 0.66
ERBB2-211ENST00000582648 B3GNT5Q9BYG0 378 aa19.18■□□□□ 0.66
ERBB2-211ENST00000582648 BCO2Q9BYV7 579 aa19.18■□□□□ 0.66
ERBB2-211ENST00000582648 ELOVL4Q9GZR5 314 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms