RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 NME7Q9Y5B8 376 aa15.46■□□□□ 0.07
MKS1-211ENST00000581761 LAMA2P24043 3122 aaKnown RBP15.46■□□□□ 0.06
MKS1-211ENST00000581761 PSTPIP1O43586 416 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 MGEA5O60502 916 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 PQBP1O60828 265 aaKnown RBP15.45■□□□□ 0.06
MKS1-211ENST00000581761 HUS1O60921 280 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 ERBB2P04626 1255 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 FGFR1P11362 822 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 TNFRSF8P28908 595 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 GJC1P36383 396 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 GPD2P43304 727 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 TAS2R40P59535 323 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 RPL7AP62424 266 aaKnown RBP15.45■□□□□ 0.06
MKS1-211ENST00000581761 FAAP100Q0VG06 881 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 ZNF268Q14587 947 aaPredicted RBP15.45■□□□□ 0.06
MKS1-211ENST00000581761 PPP2R5EQ16537 467 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 PPP1R15BQ5SWA1 713 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 ANKRD33Q7Z3H0 272 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 ADAT2Q7Z6V5 191 aaKnown RBP15.45■□□□□ 0.06
MKS1-211ENST00000581761 XYLT1Q86Y38 959 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 RHOT1Q8IXI2 618 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 IFT20Q8IY31 132 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 GSPT2Q8IYD1 628 aaKnown RBP15.45■□□□□ 0.06
MKS1-211ENST00000581761 TOP6BLQ8N6T0 577 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 APPL2Q8NEU8 664 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 CCDC26Q8TAB7 109 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 CPXM1Q96SM3 734 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 HINFPQ9BQA5 517 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 DDX47Q9H0S4 455 aaKnown RBP15.45■□□□□ 0.06
MKS1-211ENST00000581761 TRPV6Q9H1D0 765 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 PLEKHA4Q9H4M7 779 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 FAM49BQ9NUQ9 324 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 HESX1Q9UBX0 185 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 L1RE1Q9UN81 338 aa15.45■□□□□ 0.06
MKS1-211ENST00000581761 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.45■□□□□ 0.06
MKS1-211ENST00000581761 TRIM43BA6NCK2 446 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 SIGLEC16A6NMB1 481 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 RRP9O43818 475 aaKnown RBP15.44■□□□□ 0.06
MKS1-211ENST00000581761 THP07101 528 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 SETSIPP0DME0 302 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 WARSP23381 471 aaKnown RBP15.44■□□□□ 0.06
MKS1-211ENST00000581761 ITGB8P26012 769 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 GNL1P36915 607 aaPredicted RBP15.44■□□□□ 0.06
MKS1-211ENST00000581761 TNNT3P45378 269 aaPredicted RBP15.44■□□□□ 0.06
MKS1-211ENST00000581761 SCNN1GP51170 649 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 GSCP56915 257 aaPredicted RBP15.44■□□□□ 0.06
MKS1-211ENST00000581761 GUCY2DQ02846 1103 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 PPP1R26Q5T8A7 1209 aaPredicted RBP15.44■□□□□ 0.06
MKS1-211ENST00000581761 ARHGAP17Q68EM7 881 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 AGMOQ6ZNB7 445 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 OSTM1Q86WC4 334 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 SLC13A5Q86YT5 568 aaPredicted RBP15.44■□□□□ 0.06
MKS1-211ENST00000581761 FAM126BQ8IXS8 530 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 ADGRF2Q8IZF7 708 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 C12orf29Q8N999 325 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 RNF169Q8NCN4 708 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 KBTBD7Q8WVZ9 684 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 TRIM43Q96BQ3 446 aaPredicted RBP15.44■□□□□ 0.06
MKS1-211ENST00000581761 PGBD4Q96DM1 585 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 DDX27Q96GQ7 796 aaKnown RBP15.44■□□□□ 0.06
MKS1-211ENST00000581761 TOX2Q96NM4 488 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 MIS12Q9H081 205 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 DPEP3Q9H4B8 488 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 GDF3Q9NR23 364 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 ST7Q9NRC1 585 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 METTL5Q9NRN9 209 aaKnown RBP15.44■□□□□ 0.06
MKS1-211ENST00000581761 MIOSQ9NXC5 875 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 SQORQ9Y6N5 450 aa15.44■□□□□ 0.06
MKS1-211ENST00000581761 ARL5CA6NH57 179 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 PODXLO00592 558 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 CYB561D2O14569 222 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 SART1O43290 800 aaKnown RBP15.43■□□□□ 0.06
MKS1-211ENST00000581761 HCRTO43612 131 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 ZNF623O75123 536 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 PHF2O75151 1096 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 GLI1P08151 1106 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 PDGFRBP09619 1106 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 KRT3P12035 628 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 CKBP12277 381 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 SKIP12755 728 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 PSMA2P25787 234 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 GABRB2P47870 512 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 LILRA4P59901 499 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 OGDHQ02218 1023 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 ZNF252P-AS1Q0IIN9 211 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 PIGHQ14442 188 aaPredicted RBP15.43■□□□□ 0.06
MKS1-211ENST00000581761 DAB2IPQ5VWQ8 1189 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 OR6B2Q6IFH4 312 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 HDXQ7Z353 690 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 LIMS2Q7Z4I7 341 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 JOSD2Q8TAC2 188 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 ADAM2Q99965 735 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 TRAIPQ9BWF2 469 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 TSPYL2Q9H2G4 693 aaPredicted RBP15.43■□□□□ 0.06
MKS1-211ENST00000581761 PRO3102Q9H379 93 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 RSAD1Q9HA92 442 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 EPB41L5Q9HCM4 733 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 MTUS1Q9ULD2 1270 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 NR2E1Q9Y466 385 aa15.43■□□□□ 0.06
MKS1-211ENST00000581761 SASH3O75995 380 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms