RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 SOAT1P35610 550 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 APOBEC3FQ8IUX4 373 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 EIF3LQ9Y262 564 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 TM9SF1O15321 606 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 RHOBTB1O94844 696 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 PON1P27169 355 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 IZUMO2Q6UXV1 221 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 ZNF669Q96BR6 464 aaPredicted RBP15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 ZCWPW1Q9H0M4 648 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 KRT87PA6NCN2 255 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 BRD2P25440 801 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 AVPR1AP37288 418 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 PTGER2P43116 358 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 DIS3LQ8TF46 1054 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 NT5C1AQ9BXI3 368 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 SOAT2O75908 522 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 GUCA1CO95843 209 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 RARGP13631 454 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 TTC30AQ86WT1 665 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 RUVBL2Q9Y230 463 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 PDZK1P1A8MUH7 402 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 WASHC5Q12768 1159 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 OASLQ15646 514 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 AGAP9Q5VTM2 703 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 PDPK2PQ6A1A2 396 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 SLC7A14Q8TBB6 771 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 KLHL25Q9H0H3 589 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 ANKZF1Q9H8Y5 726 aa15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 PIN4Q9Y237 131 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-217ENST00000581241 A0A0A6YYK5 440 aaPredicted RBP15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 GRAP2O75791 330 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 TOMM70O94826 608 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 CD4P01730 458 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 GYS1P13807 737 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 CNTFP26441 200 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 VEPH1Q14D04 833 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 SNX17Q15036 470 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 SV2CQ496J9 727 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 PTRHD1Q6GMV3 140 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 MTDHQ86UE4 582 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 UNC45BQ8IWX7 931 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 DAGLBQ8NCG7 672 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 CCDC126Q96EE4 140 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 QTRT2Q9H974 415 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 GTF3C4Q9UKN8 822 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 C21orf2O43822 256 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 CLPTM1O96005 669 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 ZNF23P17027 643 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 FLT1P17948 1338 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 POU4F1Q01851 419 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 TKFCQ3LXA3 575 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 EFHC1Q5JVL4 640 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 UGT3A1Q6NUS8 523 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 RINLQ6ZS11 566 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 USP49Q70CQ1 688 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 UBA3Q8TBC4 463 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 DDX20Q9UHI6 824 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 CLCA2Q9UQC9 943 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 NCOA3Q9Y6Q9 1424 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 SERPIND1P05546 499 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 RBP3P10745 1247 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 AKT1P31749 480 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 RASA2Q15283 850 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 PIK3R5Q8WYR1 880 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 L1RE1Q9UN81 338 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 KDM6AO15550 1401 aaPredicted RBP15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 KANSL1LA0AUZ9 987 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 STIP1P31948 543 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 C16orf86Q6ZW13 317 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 NMD3Q96D46 503 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 NIF3L1Q9GZT8 377 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 TFE3P19532 575 aaPredicted RBP15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 DENND5BQ6ZUT9 1274 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 BTN2A2Q8WVV5 523 aa15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.09■□□□□ 0.01
CSNK1D-217ENST00000581241 CCNJLQ8IV13 435 aa15.08■□□□□ 0.01
CSNK1D-217ENST00000581241 SHCBP1LQ9BZQ2 653 aa15.08■□□□□ 0.01
CSNK1D-217ENST00000581241 SNX13Q9Y5W8 968 aa15.08■□□□□ 0.01
CSNK1D-217ENST00000581241 ZCCHC11Q5TAX3 1644 aaKnown RBP15.08■□□□□ 0
CSNK1D-217ENST00000581241 IGSF9BQ9UPX0 1349 aa15.08■□□□□ 0
CSNK1D-217ENST00000581241 SAC3D1A6NKF1 404 aa15.08■□□□□ 0
CSNK1D-217ENST00000581241 VWA5AO00534 786 aa15.08■□□□□ 0
CSNK1D-217ENST00000581241 MAP3K13O43283 966 aa15.08■□□□□ 0
CSNK1D-217ENST00000581241 SGPL1O95470 568 aa15.08■□□□□ 0
CSNK1D-217ENST00000581241 CYBBP04839 570 aa15.08■□□□□ 0
CSNK1D-217ENST00000581241 CD44P16070 742 aaKnown RBP15.08■□□□□ 0
CSNK1D-217ENST00000581241 ARMCX4Q5H9R4 360 aa15.08■□□□□ 0
CSNK1D-217ENST00000581241 CACHD1Q5VU97 1274 aa15.08■□□□□ 0
CSNK1D-217ENST00000581241 IL31Q6EBC2 164 aa15.08■□□□□ 0
CSNK1D-217ENST00000581241 VPS37AQ8NEZ2 397 aa15.08■□□□□ 0
CSNK1D-217ENST00000581241 TADA1Q96BN2 335 aa15.08■□□□□ 0
CSNK1D-217ENST00000581241 MRPS26Q9BYN8 205 aaKnown RBP15.08■□□□□ 0
CSNK1D-217ENST00000581241 EPS8L2Q9H6S3 715 aa15.08■□□□□ 0
CSNK1D-217ENST00000581241 UBOX5O94941 541 aa15.08■□□□□ 0
CSNK1D-217ENST00000581241 PTPN7P35236 360 aa15.08■□□□□ 0
CSNK1D-217ENST00000581241 CACNA2D1P54289 1103 aa15.08■□□□□ 0
CSNK1D-217ENST00000581241 ARHGAP17Q68EM7 881 aa15.08■□□□□ 0
CSNK1D-217ENST00000581241 C1orf131Q8NDD1 294 aaKnown RBP15.08■□□□□ 0
CSNK1D-217ENST00000581241 CASP10Q92851 521 aa15.08■□□□□ 0
CSNK1D-217ENST00000581241 PABPC5Q96DU9 382 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms