RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 DDX6P26196 483 aaKnown RBP eCLIP16.78■□□□□ 0.28
CDH3-204ENST00000565453 SOX9P48436 509 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 RPL10AP62906 217 aaKnown RBP16.78■□□□□ 0.28
CDH3-204ENST00000565453 CSTF1Q05048 431 aaKnown RBP16.78■□□□□ 0.28
CDH3-204ENST00000565453 STK4Q13043 487 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 MTAPQ13126 283 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 WDR44Q5JSH3 913 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 ZC3H14Q6PJT7 736 aaKnown RBP16.78■□□□□ 0.28
CDH3-204ENST00000565453 MAMSTRQ6ZN01 415 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 CMTM8Q8IZV2 173 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 PLEKHO2Q8TD55 490 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 BPIFB1Q8TDL5 484 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 CSGALNACT1Q8TDX6 532 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 CCDC127Q96BQ5 260 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 TRMT2BQ96GJ1 504 aaKnown RBP16.78■□□□□ 0.28
CDH3-204ENST00000565453 MYRFLQ96LU7 910 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 FNBP1Q96RU3 617 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 SYT15Q9BQS2 421 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 C8orf33Q9H7E9 229 aaPredicted RBP16.78■□□□□ 0.28
CDH3-204ENST00000565453 LMAN1LQ9HAT1 526 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 CRTAC1Q9NQ79 661 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 CDH9Q9ULB4 789 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 R3HCC1Q9Y3T6 440 aaKnown RBP16.78■□□□□ 0.28
CDH3-204ENST00000565453 F5P12259 2224 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 FAM237AA0A1B0GTK4 181 aa16.77■□□□□ 0.28
CDH3-204ENST00000565453 A0A1B0GVL5 298 aa16.77■□□□□ 0.28
CDH3-204ENST00000565453 SLC38A8A6NNN8 435 aa16.77■□□□□ 0.28
CDH3-204ENST00000565453 TDGF1P13385 188 aa16.77■□□□□ 0.28
CDH3-204ENST00000565453 MAGEA11P43364 429 aa16.77■□□□□ 0.28
CDH3-204ENST00000565453 PSMC1P62191 440 aaKnown RBP16.77■□□□□ 0.28
CDH3-204ENST00000565453 KMT5BQ4FZB7 885 aa16.77■□□□□ 0.28
CDH3-204ENST00000565453 TXNDC8Q6A555 127 aa16.77■□□□□ 0.28
CDH3-204ENST00000565453 TXNDC11Q6PKC3 985 aa16.77■□□□□ 0.28
CDH3-204ENST00000565453 MON1AQ86VX9 555 aa16.77■□□□□ 0.28
CDH3-204ENST00000565453 SPATA2LQ8IUW3 424 aaPredicted RBP16.77■□□□□ 0.28
CDH3-204ENST00000565453 CELF5Q8N6W0 485 aaKnown RBP16.77■□□□□ 0.28
CDH3-204ENST00000565453 MAB21L3Q8N8X9 362 aa16.77■□□□□ 0.28
CDH3-204ENST00000565453 ZBTB44Q8NCP5 570 aa16.77■□□□□ 0.28
CDH3-204ENST00000565453 TMEM174Q8WUU8 243 aa16.77■□□□□ 0.28
CDH3-204ENST00000565453 USP13Q92995 863 aaPredicted RBP16.77■□□□□ 0.28
CDH3-204ENST00000565453 MYLPFQ96A32 169 aa16.77■□□□□ 0.28
CDH3-204ENST00000565453 MRPL45Q9BRJ2 306 aaKnown RBP16.77■□□□□ 0.28
CDH3-204ENST00000565453 IER2Q9BTL4 223 aa16.77■□□□□ 0.28
CDH3-204ENST00000565453 DMAC2Q9NW81 257 aa16.77■□□□□ 0.28
CDH3-204ENST00000565453 GTSE1Q9NYZ3 720 aa16.77■□□□□ 0.28
CDH3-204ENST00000565453 USP25Q9UHP3 1055 aa16.77■□□□□ 0.28
CDH3-204ENST00000565453 MAGED2Q9UNF1 606 aaPredicted RBP16.77■□□□□ 0.28
CDH3-204ENST00000565453 SPECC1L-ADORA2AF8WAN1 911 aa16.76■□□□□ 0.27
CDH3-204ENST00000565453 TACC1O75410 805 aa16.76■□□□□ 0.27
CDH3-204ENST00000565453 STAU1O95793 577 aaKnown RBP16.76■□□□□ 0.27
CDH3-204ENST00000565453 FAM163BP0C2L3 166 aa16.76■□□□□ 0.27
CDH3-204ENST00000565453 CTHP32929 405 aa16.76■□□□□ 0.27
CDH3-204ENST00000565453 KPNA1P52294 538 aaPredicted RBP16.76■□□□□ 0.27
CDH3-204ENST00000565453 PLCB2Q00722 1185 aa16.76■□□□□ 0.27
CDH3-204ENST00000565453 TNK2Q07912 1038 aa16.76■□□□□ 0.27
CDH3-204ENST00000565453 PSMD2Q13200 908 aa16.76■□□□□ 0.27
CDH3-204ENST00000565453 GAS6Q14393 721 aa16.76■□□□□ 0.27
CDH3-204ENST00000565453 C1orf228Q6PIY5 440 aa16.76■□□□□ 0.27
CDH3-204ENST00000565453 C4orf50Q6ZRC1 276 aa16.76■□□□□ 0.27
CDH3-204ENST00000565453 SUMF1Q8NBK3 374 aa16.76■□□□□ 0.27
CDH3-204ENST00000565453 RIN3Q8TB24 985 aa16.76■□□□□ 0.27
CDH3-204ENST00000565453 SPATA32Q96LK8 384 aa16.76■□□□□ 0.27
CDH3-204ENST00000565453 XYLT2Q9H1B5 865 aa16.76■□□□□ 0.27
CDH3-204ENST00000565453 KCTD10Q9H3F6 313 aa16.76■□□□□ 0.27
CDH3-204ENST00000565453 EXOC1Q9NV70 894 aa16.76■□□□□ 0.27
CDH3-204ENST00000565453 MAGEC2Q9UBF1 373 aaPredicted RBP16.76■□□□□ 0.27
CDH3-204ENST00000565453 UXTQ9UBK9 157 aaPredicted RBP16.76■□□□□ 0.27
CDH3-204ENST00000565453 CCL26Q9Y258 94 aa16.76■□□□□ 0.27
CDH3-204ENST00000565453 EXOC3O60645 756 aa16.75■□□□□ 0.27
CDH3-204ENST00000565453 LILRB5O75023 590 aa16.75■□□□□ 0.27
CDH3-204ENST00000565453 CASP4P49662 377 aa16.75■□□□□ 0.27
CDH3-204ENST00000565453 MYL6P60660 151 aa16.75■□□□□ 0.27
CDH3-204ENST00000565453 CLDN10P78369 228 aa16.75■□□□□ 0.27
CDH3-204ENST00000565453 KRT85P78386 507 aa16.75■□□□□ 0.27
CDH3-204ENST00000565453 ZNF268Q14587 947 aaPredicted RBP16.75■□□□□ 0.27
CDH3-204ENST00000565453 TSSK4Q6SA08 328 aa16.75■□□□□ 0.27
CDH3-204ENST00000565453 RALGPS2Q86X27 583 aaPredicted RBP16.75■□□□□ 0.27
CDH3-204ENST00000565453 SLC9A9Q8IVB4 645 aa16.75■□□□□ 0.27
CDH3-204ENST00000565453 SCN4BQ8IWT1 228 aa16.75■□□□□ 0.27
CDH3-204ENST00000565453 TTC8Q8TAM2 541 aa16.75■□□□□ 0.27
CDH3-204ENST00000565453 GOLGA5Q8TBA6 731 aa16.75■□□□□ 0.27
CDH3-204ENST00000565453 MRPS31Q92665 395 aaKnown RBP16.75■□□□□ 0.27
CDH3-204ENST00000565453 MMS19Q96T76 1030 aa16.75■□□□□ 0.27
CDH3-204ENST00000565453 FAM83CQ9BQN1 747 aa16.75■□□□□ 0.27
CDH3-204ENST00000565453 KIF9Q9HAQ2 790 aa16.75■□□□□ 0.27
CDH3-204ENST00000565453 ZSCAN32Q9NX65 697 aa16.75■□□□□ 0.27
CDH3-204ENST00000565453 PCDHGA2Q9Y5H1 932 aa16.75■□□□□ 0.27
CDH3-204ENST00000565453 FAM186AA6NE01 2351 aa16.75■□□□□ 0.27
CDH3-204ENST00000565453 PTPRDP23468 1912 aa16.74■□□□□ 0.27
CDH3-204ENST00000565453 RIF1Q5UIP0 2472 aaKnown RBP16.74■□□□□ 0.27
CDH3-204ENST00000565453 LRRIQ3A6PVS8 624 aaPredicted RBP16.74■□□□□ 0.27
CDH3-204ENST00000565453 KINO60870 393 aaKnown RBP16.74■□□□□ 0.27
CDH3-204ENST00000565453 MYL1P05976 194 aa16.74■□□□□ 0.27
CDH3-204ENST00000565453 PDGFRBP09619 1106 aa16.74■□□□□ 0.27
CDH3-204ENST00000565453 ATICP31939 592 aa16.74■□□□□ 0.27
CDH3-204ENST00000565453 AVPR1AP37288 418 aa16.74■□□□□ 0.27
CDH3-204ENST00000565453 WDR72Q3MJ13 1102 aa16.74■□□□□ 0.27
CDH3-204ENST00000565453 VSTM1Q6UX27 236 aa16.74■□□□□ 0.27
CDH3-204ENST00000565453 MYCBPAPQ8TBZ2 947 aa16.74■□□□□ 0.27
CDH3-204ENST00000565453 PARD3BQ8TEW8 1205 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms