RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 IRX3P78415 501 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 LONRF2Q1L5Z9 754 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 EEF1DP3Q658K8 133 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 CTAGE6Q86UF2 777 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 CTAGE4Q8IX94 777 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 DENND1AQ8TEH3 1009 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 FGD4Q96M96 766 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 OSBPL1AQ9BXW6 950 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 GPR88Q9GZN0 384 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 RNF39Q9H2S5 420 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 ARL15Q9NXU5 204 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 GRID2IPA4D2P6 1211 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 C2orf71A6NGG8 1288 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 RAD51CO43502 376 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 AVILO75366 819 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 ASNSP08243 561 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 MYBL1P10243 752 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 CDH2P19022 906 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 RARRES1P49788 294 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 WASHC5Q12768 1159 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 MMRN1Q13201 1228 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 FAM92BQ6ZTR7 304 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 ZDHHC14Q8IZN3 488 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 XPO6Q96QU8 1125 aaKnown RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 C11orf70Q9BRQ4 267 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 OSBPL10Q9BXB5 764 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 BRD8Q9H0E9 1235 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 AGO4Q9HCK5 861 aaKnown RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 PPANQ9NQ55 473 aaKnown RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.52□□□□□ -1.858e-7■■■■□ 21.3
CHD9-213ENST00000564845 DDX41Q9UJV9 622 aaKnown RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 ANAPC5Q9UJX4 755 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 SNCAIPQ9Y6H5 919 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 PLIN4Q96Q06 1357 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 CLDN3O15551 220 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 CA8P35219 290 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 ATN1P54259 1190 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 MAPK7Q13164 816 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 AADATQ8N5Z0 425 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 HSPH1Q92598 858 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 SLC10A4Q96EP9 437 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 SCN4AP35499 1836 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 A0A087WZ62 844 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 ERN1O75460 977 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 FTLP02792 175 aaPredicted RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 RPA1P27694 616 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 CAPZA2P47755 286 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 PHEXP78562 749 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 LACTBP83111 547 aaPredicted RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 ASTE1Q2TB18 679 aaPredicted RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 NIPAL1Q6NVV3 410 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 SCYL2Q6P3W7 929 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 KLC3Q6P597 504 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 APOBEC3FQ8IUX4 373 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 CD302Q8IX05 232 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 HDAC2Q92769 488 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 FDXACB1Q9BRP7 624 aaPredicted RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 NEK6Q9HC98 313 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 GLRA2P23416 452 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 SREBF1P36956 1147 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 NNMTP40261 264 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 CCDC80Q76M96 950 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 PALM2Q8IXS6 379 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 OSBPL9Q96SU4 736 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 NAPGQ99747 312 aaPredicted RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 PAIP2Q9BPZ3 127 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 RANBP17Q9H2T7 1088 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 AGPAT3Q9NRZ7 376 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 GTF3C4Q9UKN8 822 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 BAG5Q9UL15 447 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 ATP8A1Q9Y2Q0 1164 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 MRPL11Q9Y3B7 192 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 SAR1BQ9Y6B6 198 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 TLR3O15455 904 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 DYNC1LI2O43237 492 aaPredicted RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 CHEK2O96017 543 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 HDAC4P56524 1084 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 ZBED6P86452 979 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 MAPRE2Q15555 327 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 BSPRYQ5W0U4 402 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 ALKBH5Q6P6C2 394 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 FAM47EQ6ZV65 393 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 KIAA0319LQ8IZA0 1049 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 PSPC1Q8WXF1 523 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 TMEM117Q9H0C3 514 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 INPP5FQ9Y2H2 1132 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 FNDC3AQ9Y2H6 1198 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 MYPNQ86TC9 1320 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 WDR91A4D1P6 747 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 NOP56O00567 594 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 HSPA1AP0DMV8 641 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 HSPA1BP0DMV9 641 aaKnown RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 CDC25BP30305 580 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 GTF2A2P52657 109 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 PLTPP55058 493 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 UGP2Q16851 508 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 SFMBT2Q5VUG0 894 aa3.51□□□□□ -1.85
CHD9-213ENST00000564845 SMAP1Q8IYB5 467 aaPredicted RBP3.51□□□□□ -1.85
CHD9-213ENST00000564845 NPLOC4Q8TAT6 608 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms