RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 TRIM44Q96DX7 344 aaPredicted RBP18.02■□□□□ 0.48
CMTM3-208ENST00000564247 HERC2P3Q9BVR0 1158 aa18.02■□□□□ 0.48
CMTM3-208ENST00000564247 PDCL3Q9H2J4 239 aa18.02■□□□□ 0.48
CMTM3-208ENST00000564247 DEF6Q9H4E7 631 aa18.02■□□□□ 0.48
CMTM3-208ENST00000564247 SSX2IPQ9Y2D8 614 aa18.02■□□□□ 0.48
CMTM3-208ENST00000564247 HCFC2Q9Y5Z7 792 aa18.02■□□□□ 0.48
CMTM3-208ENST00000564247 MED7O43513 233 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 VDRP11473 427 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 CD19P15391 556 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 HOXB8P17481 243 aaPredicted RBP18.01■□□□□ 0.47
CMTM3-208ENST00000564247 TNFAIP3P21580 790 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 TKTP29401 623 aaKnown RBP18.01■□□□□ 0.47
CMTM3-208ENST00000564247 DEKP35659 375 aaKnown RBP18.01■□□□□ 0.47
CMTM3-208ENST00000564247 ANKRD54Q6NXT1 300 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 LLGL2Q6P1M3 1020 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 WDR59Q6PJI9 974 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 SLC47A2Q86VL8 602 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 OSTM1Q86WC4 334 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 ZNF677Q86XU0 584 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 GPIHBP1Q8IV16 184 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 CRYBG2Q8N1P7 616 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 SLC4A11Q8NBS3 891 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 WHAMMQ8TF30 809 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 CCDC42Q96M95 316 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 ACBD6Q9BR61 282 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 TTPALQ9BTX7 342 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 EMILIN2Q9BXX0 1053 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 OXCT2Q9BYC2 517 aaPredicted RBP18.01■□□□□ 0.47
CMTM3-208ENST00000564247 ELOVL4Q9GZR5 314 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 HAUS4Q9H6D7 363 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 MRPL17Q9NRX2 175 aaKnown RBP18.01■□□□□ 0.47
CMTM3-208ENST00000564247 CDH9Q9ULB4 789 aa18.01■□□□□ 0.47
CMTM3-208ENST00000564247 THAP12O43422 761 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 OAZ2O95190 189 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 URODP06132 367 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 CYP11B1P15538 503 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 LMO2P25791 158 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 TSPY1Q01534 308 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 ZP2Q05996 745 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 SGO2Q562F6 1265 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 VARS2Q5ST30 1063 aaKnown RBP18■□□□□ 0.47
CMTM3-208ENST00000564247 E4F1Q66K89 784 aaPredicted RBP18■□□□□ 0.47
CMTM3-208ENST00000564247 HGSNATQ68CP4 663 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 ANKS3Q6ZW76 656 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 TAS1R1Q7RTX1 841 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 ACOT1Q86TX2 421 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 ADHFE1Q8IWW8 467 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 GJD3Q8N144 294 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 CHP1Q99653 195 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 AGPAT1Q99943 283 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18■□□□□ 0.47
CMTM3-208ENST00000564247 S1PR5Q9H228 398 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 NHEJ1Q9H9Q4 299 aaPredicted RBP18■□□□□ 0.47
CMTM3-208ENST00000564247 CD320Q9NPF0 282 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 CHST7Q9NS84 486 aa18■□□□□ 0.47
CMTM3-208ENST00000564247 USP15Q9Y4E8 981 aaPredicted RBP18■□□□□ 0.47
CMTM3-208ENST00000564247 SSU72P8A0A1W2PR75 194 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 C19orf67A6NJJ6 358 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 CNPP09543 421 aaKnown RBP17.99■□□□□ 0.47
CMTM3-208ENST00000564247 PTPN1P18031 435 aaKnown RBP17.99■□□□□ 0.47
CMTM3-208ENST00000564247 FECHP22830 423 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 ANXA13P27216 316 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 CYLC1P35663 651 aaPredicted RBP17.99■□□□□ 0.47
CMTM3-208ENST00000564247 EIF4A3P38919 411 aaKnown RBP17.99■□□□□ 0.47
CMTM3-208ENST00000564247 GLUD2P49448 558 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 ORC1Q13415 861 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 STILQ15468 1287 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 KIAA0319Q5VV43 1072 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 ZNF280DQ6N043 979 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 SYCE2Q6PIF2 218 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 GPR65Q8IYL9 337 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 CCDC170Q8IYT3 715 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 SLC22A17Q8WUG5 538 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 ZNF606Q8WXB4 792 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 SUSD6Q92537 303 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 KLHL5Q96PQ7 755 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 TWNKQ96RR1 684 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 SYT15Q9BQS2 421 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 SEPT11Q9NVA2 429 aaKnown RBP17.99■□□□□ 0.47
CMTM3-208ENST00000564247 ARHGAP20Q9P2F6 1191 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 HMGXB4Q9UGU5 601 aa17.99■□□□□ 0.47
CMTM3-208ENST00000564247 OR6C75A6NL08 312 aa17.98■□□□□ 0.47
CMTM3-208ENST00000564247 AKR1B10O60218 316 aa17.98■□□□□ 0.47
CMTM3-208ENST00000564247 ACAT1P24752 427 aaKnown RBP17.98■□□□□ 0.47
CMTM3-208ENST00000564247 SSTR3P32745 418 aaPredicted RBP17.98■□□□□ 0.47
CMTM3-208ENST00000564247 CDR2Q01850 454 aa17.98■□□□□ 0.47
CMTM3-208ENST00000564247 DSG1Q02413 1049 aa17.98■□□□□ 0.47
CMTM3-208ENST00000564247 MAPK8IP2Q13387 824 aaPredicted RBP17.98■□□□□ 0.47
CMTM3-208ENST00000564247 MRPL58Q14197 206 aaKnown RBP17.98■□□□□ 0.47
CMTM3-208ENST00000564247 MAPRE1Q15691 268 aaKnown RBP17.98■□□□□ 0.47
CMTM3-208ENST00000564247 CNGA2Q16280 664 aa17.98■□□□□ 0.47
CMTM3-208ENST00000564247 CTXN3Q4LDR2 81 aa17.98■□□□□ 0.47
CMTM3-208ENST00000564247 ZNF571Q7Z3V5 609 aaPredicted RBP17.98■□□□□ 0.47
CMTM3-208ENST00000564247 NOP9Q86U38 636 aaKnown RBP17.98■□□□□ 0.47
CMTM3-208ENST00000564247 DCP1BQ8IZD4 617 aaKnown RBP17.98■□□□□ 0.47
CMTM3-208ENST00000564247 B3GALNT2Q8NCR0 500 aa17.98■□□□□ 0.47
CMTM3-208ENST00000564247 EPS8L1Q8TE68 723 aa17.98■□□□□ 0.47
CMTM3-208ENST00000564247 ZNF830Q96NB3 372 aaPredicted RBP17.98■□□□□ 0.47
CMTM3-208ENST00000564247 RXFP1Q9HBX9 757 aa17.98■□□□□ 0.47
CMTM3-208ENST00000564247 ACP6Q9NPH0 428 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms