RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 CRTAC1Q9NQ79 661 aa17.11■□□□□ 0.33
LMX1B-204ENST00000561065 NDRG2Q9UN36 371 aaKnown RBP17.11■□□□□ 0.33
LMX1B-204ENST00000561065 DCHS1Q96JQ0 3298 aa17.1■□□□□ 0.33
LMX1B-204ENST00000561065 ZNF263O14978 683 aa17.1■□□□□ 0.33
LMX1B-204ENST00000561065 FGF19O95750 216 aa17.1■□□□□ 0.33
LMX1B-204ENST00000561065 MYO1EQ12965 1108 aa17.1■□□□□ 0.33
LMX1B-204ENST00000561065 FAM171BQ6P995 826 aa17.1■□□□□ 0.33
LMX1B-204ENST00000561065 NKD2Q969F2 451 aaPredicted RBP17.1■□□□□ 0.33
LMX1B-204ENST00000561065 MYLPFQ96A32 169 aa17.1■□□□□ 0.33
LMX1B-204ENST00000561065 SYT15Q9BQS2 421 aa17.1■□□□□ 0.33
LMX1B-204ENST00000561065 MRPL45Q9BRJ2 306 aaKnown RBP17.1■□□□□ 0.33
LMX1B-204ENST00000561065 SLC46A2Q9BY10 475 aa17.1■□□□□ 0.33
LMX1B-204ENST00000561065 KCTD10Q9H3F6 313 aa17.1■□□□□ 0.33
LMX1B-204ENST00000561065 GOLPH3LQ9H4A5 285 aa17.1■□□□□ 0.33
LMX1B-204ENST00000561065 SPATA6Q9NWH7 488 aaPredicted RBP17.1■□□□□ 0.33
LMX1B-204ENST00000561065 CCL26Q9Y258 94 aa17.1■□□□□ 0.33
LMX1B-204ENST00000561065 SLC38A8A6NNN8 435 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 CHADO15335 359 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 NOL4O94818 638 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 ZNF202O95125 648 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 TNNI1P19237 187 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 WARSP23381 471 aaKnown RBP17.09■□□□□ 0.33
LMX1B-204ENST00000561065 PCSK1P29120 753 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 WEE1P30291 646 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 LHX1P48742 406 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 NDUFA8P51970 172 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 CFAP221Q4G0U5 840 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 ARHGAP15Q53QZ3 475 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 TXNDC11Q6PKC3 985 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 DPH6Q7L8W6 267 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 E2F7Q96AV8 911 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 GCNAQ96QF7 691 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 FNBP1Q96RU3 617 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 XYLT2Q9H1B5 865 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 MAGED2Q9UNF1 606 aaPredicted RBP17.09■□□□□ 0.33
LMX1B-204ENST00000561065 DMXL1Q9Y485 3027 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 OTOGLQ3ZCN5 2332 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 ZNF292O60281 2723 aa17.09■□□□□ 0.33
LMX1B-204ENST00000561065 RPS9P46781 194 aaKnown RBP17.08■□□□□ 0.32
LMX1B-204ENST00000561065 TNK2Q07912 1038 aa17.08■□□□□ 0.32
LMX1B-204ENST00000561065 TDRD10Q5VZ19 366 aaKnown RBP17.08■□□□□ 0.32
LMX1B-204ENST00000561065 ELMO3Q96BJ8 720 aa17.08■□□□□ 0.32
LMX1B-204ENST00000561065 FUBP3Q96I24 572 aaKnown RBP eCLIP17.08■□□□□ 0.32
LMX1B-204ENST00000561065 GDPD2Q9HCC8 539 aa17.08■□□□□ 0.32
LMX1B-204ENST00000561065 PRMT8Q9NR22 394 aaPredicted RBP17.08■□□□□ 0.32
LMX1B-204ENST00000561065 DMAC2Q9NW81 257 aa17.08■□□□□ 0.32
LMX1B-204ENST00000561065 OBP2AQ9NY56 170 aa17.08■□□□□ 0.32
LMX1B-204ENST00000561065 GTSE1Q9NYZ3 720 aa17.08■□□□□ 0.32
LMX1B-204ENST00000561065 PTPRZ1P23471 2315 aaPredicted RBP17.08■□□□□ 0.32
LMX1B-204ENST00000561065 LRRIQ3A6PVS8 624 aaPredicted RBP17.07■□□□□ 0.32
LMX1B-204ENST00000561065 EXOC3O60645 756 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 CSH1P0DML2 217 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 CSH2P0DML3 217 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 CCNE1P24864 410 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 MAGEA9P43362 315 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 MYL6P60660 151 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 MTAPQ13126 283 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 TAF12Q16514 161 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 TXNDC8Q6A555 127 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 KRBA2Q6ZNG9 492 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 SPATA2LQ8IUW3 424 aaPredicted RBP17.07■□□□□ 0.32
LMX1B-204ENST00000561065 YAF2Q8IY57 180 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 CMTM8Q8IZV2 173 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 MAB21L3Q8N8X9 362 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 TTC8Q8TAM2 541 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 BPIFB1Q8TDL5 484 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 FAM3CQ92520 227 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 USP13Q92995 863 aaPredicted RBP17.07■□□□□ 0.32
LMX1B-204ENST00000561065 TRMT2BQ96GJ1 504 aaKnown RBP17.07■□□□□ 0.32
LMX1B-204ENST00000561065 MYRFLQ96LU7 910 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 MMS19Q96T76 1030 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 CHRDQ9H2X0 955 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 DPEP3Q9H4B8 488 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 TMEM30AQ9NV96 361 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 RMND1Q9NWS8 449 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 CDH9Q9ULB4 789 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 MRPS17Q9Y2R5 130 aaKnown RBP17.07■□□□□ 0.32
LMX1B-204ENST00000561065 GPR179Q6PRD1 2367 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 MYO16Q9Y6X6 1858 aa17.07■□□□□ 0.32
LMX1B-204ENST00000561065 KIAA1549LQ6ZVL6 1849 aa17.06■□□□□ 0.32
LMX1B-204ENST00000561065 MAN2B1O00754 1011 aa17.06■□□□□ 0.32
LMX1B-204ENST00000561065 DPYSL4O14531 572 aa17.06■□□□□ 0.32
LMX1B-204ENST00000561065 LAMTOR5O43504 91 aa17.06■□□□□ 0.32
LMX1B-204ENST00000561065 SMC2O95347 1197 aa17.06■□□□□ 0.32
LMX1B-204ENST00000561065 STAU1O95793 577 aaKnown RBP17.06■□□□□ 0.32
LMX1B-204ENST00000561065 RPN1P04843 607 aaKnown RBP17.06■□□□□ 0.32
LMX1B-204ENST00000561065 PDGFRBP09619 1106 aa17.06■□□□□ 0.32
LMX1B-204ENST00000561065 CHRNB1P11230 501 aa17.06■□□□□ 0.32
LMX1B-204ENST00000561065 CTHP32929 405 aa17.06■□□□□ 0.32
LMX1B-204ENST00000561065 MAGEA11P43364 429 aa17.06■□□□□ 0.32
LMX1B-204ENST00000561065 CACNA2D1P54289 1103 aa17.06■□□□□ 0.32
LMX1B-204ENST00000561065 RPL10AP62906 217 aaKnown RBP17.06■□□□□ 0.32
LMX1B-204ENST00000561065 DLG4P78352 724 aa17.06■□□□□ 0.32
LMX1B-204ENST00000561065 GAS6Q14393 721 aa17.06■□□□□ 0.32
LMX1B-204ENST00000561065 ARHGAP29Q52LW3 1261 aa17.06■□□□□ 0.32
LMX1B-204ENST00000561065 TSSK4Q6SA08 328 aa17.06■□□□□ 0.32
LMX1B-204ENST00000561065 SCN4BQ8IWT1 228 aa17.06■□□□□ 0.32
LMX1B-204ENST00000561065 PARD3BQ8TEW8 1205 aa17.06■□□□□ 0.32
LMX1B-204ENST00000561065 CHFRQ96EP1 664 aa17.06■□□□□ 0.32
LMX1B-204ENST00000561065 PCED1BQ96HM7 432 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms